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bam files after realignment & output_dis file #56

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bsgilgi opened this issue Sep 13, 2020 · 0 comments

bsgilgi commented Sep 13, 2020

Hello,
Thank you for the msisensor tool.
I have 2 questions:

I am using bam files after the GATK workflow. Is this a valid input for msisensor?
I have a question regarding the output_dis file (I am using v 0.6).
I thought that this file has the lengths of the microstaellites. However it always has 100 values for T and for N.
What are these values?

Thank you

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