GO extensions: AND or OR

[pfey03]

In P2GO, we add extensions >1 for one annotations as AND or OR

AND is separated by a comma: ,
OR is separated by a pipe: |

Attached is the GPAD from QuickGOof gene gflB (Q54L90) EXP annotations, where the long string of extensions for GO:GO:0030837/ negative regulation of Ras protein signal transduction looks all the same and thus somewhat contradictory:
happens_during (response to cAMP)
happens_during (asexual reproduction)
In the file, the last, happens_during (asexual reproduction), is separated by a Pipe thus we should introduce these OR in dictybase.

This dictybase annotation
https://testdb.dictybase.org/gene/gflB/goannotations

Current:
has_regulation_target (rasB)
has_regulation_target (rasC)
has_regulation_target (rasG)
happens_during (response to cAMP)
occurs_at (cell leading edge cell cortex)
happens_during (asexual reproduction)

Possibly, if AND, we should just separate them by Comma (saves also space) and when it's OR, we add the word 'or':

New:
has_regulation_target (rasB), has_regulation_target (rasC),
has_regulation_target (rasG), happens_during (response to cAMP),
occurs_at (cell leading edge cell cortex)
or happens_during (asexual reproduction)

Thus, if column space allows,

• More than 1 extension can go into one line if fitting into column
• No line breaks within extension
• AND annotations separated by comma and a space
• OR annotations should always start at a new line with the non italic 'or' preceding the relation instead of doing a Pipe
• Normally there should not be > 1 OR, but I'm not sure. The above rules should apply even if >1 OR

Thanks!

QuickGO-annotations-1544477509162-20181210gpad.txt