From dfc94dba4960250b5d787fa1f05a2d7b8a8f3fe4 Mon Sep 17 00:00:00 2001 From: Infant Alex Date: Fri, 1 Mar 2024 16:49:04 +0100 Subject: [PATCH 1/3] Adding support for pydantic-v1 --- cognite/cdffs/__init__.py | 3 +- cognite/cdffs/credentials.py | 32 +- docs/requirements.txt | 8 +- docs/source/index.rst | 8 +- poetry.lock | 955 ++++++++++++++++++----------------- pyproject.toml | 30 +- 6 files changed, 537 insertions(+), 499 deletions(-) diff --git a/cognite/cdffs/__init__.py b/cognite/cdffs/__init__.py index a574467..c24ec35 100644 --- a/cognite/cdffs/__init__.py +++ b/cognite/cdffs/__init__.py @@ -1,9 +1,10 @@ """Initialize the cdffs package.""" + import fsspec from .spec import CdfFileSystem -__version__ = "0.3.3" +__version__ = "0.3.4" __all__ = ["CdfFileSystem"] fsspec.register_implementation(CdfFileSystem.protocol, CdfFileSystem) diff --git a/cognite/cdffs/credentials.py b/cognite/cdffs/credentials.py index 06807bd..7444672 100644 --- a/cognite/cdffs/credentials.py +++ b/cognite/cdffs/credentials.py @@ -1,11 +1,20 @@ """Construct cognite client config from environment variables.""" + from abc import ABC, abstractmethod from typing import Any, List, Optional, Union from cognite.client import ClientConfig, CogniteClient from cognite.client.credentials import OAuthClientCredentials, Token -from pydantic import ConfigDict, SecretStr, field_validator -from pydantic_settings import BaseSettings + +try: + from pydantic import BaseSettings, ConfigDict, SecretStr, validator + + is_pydantic_v2 = False +except ImportError: + from pydantic import ConfigDict, SecretStr, field_validator + from pydantic_settings import BaseSettings + + is_pydantic_v2 = True def validate_scopes(cls: Any, value: str) -> Optional[List]: @@ -70,7 +79,10 @@ class FsOAuthCredentials(FsCredentials, FsConfig): scopes: Optional[Union[str, List]] = None # Validator - _scopes = field_validator("scopes")(validate_scopes) + if is_pydantic_v2: + _scopes = field_validator("scopes")(validate_scopes) + else: + _scopes = validator("scopes")(validate_scopes) def get_credentials(self) -> OAuthClientCredentials: """Construct credentials based on environment variables. @@ -112,11 +124,21 @@ def get_connection_config(env_file: str) -> CogniteClient: """Construct Cognite Client from environment variables.""" credentials = FsOAuthCredentials(_env_file=env_file) connection_config = None - if all(value is not None for _, value in credentials.model_dump().items()): + + if is_pydantic_v2: + credentials_dump = credentials.model_dump().items() + else: + credentials_dump = credentials.dict().items() + + if all(value is not None for _, value in credentials_dump): connection_config = credentials.get_client_config() else: token = FsToken(_env_file=env_file) - if all(value is not None for _, value in token.model_dump().items()): + if is_pydantic_v2: + token_dump = token.model_dump().items() + else: + token_dump = token.dict().items() + if all(value is not None for _, value in token_dump): connection_config = token.get_client_config() return connection_config diff --git a/docs/requirements.txt b/docs/requirements.txt index 0c7bfea..8a134a2 100644 --- a/docs/requirements.txt +++ b/docs/requirements.txt @@ -1,8 +1,8 @@ toml==0.10.2 -fsspec==2023.10.0 -cognite-sdk==7.1.0 +fsspec==2024.2.0 +cognite-sdk==7.26.0 requests==2.31.0 -pydantic==2.5.1 -sphinx-rtd-theme==1.3.0 +pydantic==2.6.3 +sphinx-rtd-theme==2.0.0 tenacity==8.2.3 pydantic_settings==2.1.0 diff --git a/docs/source/index.rst b/docs/source/index.rst index c1f9c1d..16fffae 100644 --- a/docs/source/index.rst +++ b/docs/source/index.rst @@ -9,7 +9,13 @@ the list of all supported/compatible python packages. Installation ^^^^^^^^^^^^ -To install this package: +To install this package(Recommended): + + .. code-block:: bash + + pip install cognite-cdffs[pydanticv2] + +If you need `cdffs` to be compatible with pydantic-v1, choose to install the expected pydantic-v1 (`^1.10.7`) and use, .. code-block:: bash diff --git a/poetry.lock b/poetry.lock index d975d07..59468f9 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.7.0 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. 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["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (<7.2.5)", "sphinx (>=3.5)", "sphinx-lint"] testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"] +[extras] +pydanticv2 = ["pydantic-settings"] + [metadata] lock-version = "2.0" python-versions = ">=3.9.10,<3.13" -content-hash = "a4bd6e0a6184246e79eafcd46b1b059f19555a7f3273415196601ab7b866c213" +content-hash = "283bd3605113d5015e2f31632ed94b6f24aadc076e1e9b487d854e326483b647" diff --git a/pyproject.toml b/pyproject.toml index f38a514..d748c23 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "cognite-cdffs" -version = "0.3.3" +version = "0.3.4" description = "File System Interface for CDF Files" license = "Apache-2.0" authors = ["Infant Alex "] @@ -9,23 +9,22 @@ packages = [ { include="cognite", from="." }, ] [tool.poetry.group.test.dependencies] -pandas = "^2.2.0" +pandas = "^2.2.1" pyarrow = "^15.0.0" -zarr = "^2.16.1" -dask = "^2024.1.1" -xarray = "^2024.1.1" +zarr = "^2.17.0" +dask = "^2024.2.1" +xarray = "^2024.2.0" geodatasets = "^2023.12.0" geopandas = "^0.14.3" [tool.poetry.group.dev.dependencies] -types-requests = "^2.28.11.5" +types-requests = "^2.31.0.20240218" pytest-cov = "^4.1.0" -black = "^24.1.1" -responses = "^0.24.1" +black = "^24.2.0" +responses = "^0.25.0" flake8 = "^7.0.0" -pre-commit = "^3.6.0" +pre-commit = "^3.6.2" flake8-pyproject = "^1.2.3" -twine = "^4.0.2" toml = "^0.10.2" sphinx-rtd-theme = "^2.0.0" @@ -68,16 +67,17 @@ commands = [tool.poetry.dependencies] python = ">=3.9.10,<3.13" -cognite-sdk = "^7.16.0" -fsspec = "^2023.12.2" +cognite-sdk = "^7.26.0" +fsspec = "^2024.2.0" requests = "^2.31.0" twine = "^4.0.2" -pydantic = "^2.6.0" +pydantic = {version =">=1.10.7"} python-dotenv = "^1.0.1" -pydantic-settings = "^2.0.3" +pydantic-settings = {version="^2.0.3", optional = true} tenacity = "^8.2.3" -[tool.poetry.dev-dependencies] +[tool.poetry.extras] +pydanticv2 = ["pydantic-settings"] [build-system] requires = ["poetry>=0.12"] From 6f9a1b3573518c739dc2a70f97aa17e2d5ce05f7 Mon Sep 17 00:00:00 2001 From: Infant Alex Date: Mon, 4 Mar 2024 13:06:43 +0100 Subject: [PATCH 2/3] Adding extras to Github Actions --- .github/workflows/ci.yaml | 4 ++-- .github/workflows/publish.yaml | 2 +- docs/source/index.rst | 2 +- pyproject.toml | 2 +- 4 files changed, 5 insertions(+), 5 deletions(-) diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml index 43126db..da16302 100644 --- a/.github/workflows/ci.yaml +++ b/.github/workflows/ci.yaml @@ -15,7 +15,7 @@ jobs: - name: Install dependencies run: | python3 -m pip install --upgrade pip poetry==1.2.2 - poetry install + poetry install --extras "settings" - name: Linting run: | @@ -33,7 +33,7 @@ jobs: - name: Install dependencies run: | python3 -m pip install --upgrade pip poetry==1.2.2 - poetry install + poetry install --extras "settings" - name: Run tests env: diff --git a/.github/workflows/publish.yaml b/.github/workflows/publish.yaml index 0ffe000..937d63f 100644 --- a/.github/workflows/publish.yaml +++ b/.github/workflows/publish.yaml @@ -23,7 +23,7 @@ jobs: run: | python3 -m pip install --upgrade pip poetry==1.2.2 poetry config virtualenvs.create false - poetry install + poetry install --extras "settings" - name: Linting run: | diff --git a/docs/source/index.rst b/docs/source/index.rst index 16fffae..090ae18 100644 --- a/docs/source/index.rst +++ b/docs/source/index.rst @@ -13,7 +13,7 @@ To install this package(Recommended): .. code-block:: bash - pip install cognite-cdffs[pydanticv2] + pip install cognite-cdffs[settings] If you need `cdffs` to be compatible with pydantic-v1, choose to install the expected pydantic-v1 (`^1.10.7`) and use, diff --git a/pyproject.toml b/pyproject.toml index d748c23..f8e37dd 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -77,7 +77,7 @@ pydantic-settings = {version="^2.0.3", optional = true} tenacity = "^8.2.3" [tool.poetry.extras] -pydanticv2 = ["pydantic-settings"] +settings = ["pydantic-settings"] [build-system] requires = ["poetry>=0.12"] From 2a6e38977de75e61e08152e54bd9410e8e791516 Mon Sep 17 00:00:00 2001 From: Infant Alex Date: Mon, 4 Mar 2024 13:22:31 +0100 Subject: [PATCH 3/3] updates to poetry lock and pyproject.toml --- poetry.lock | 30 +++++++++++++++--------------- pyproject.toml | 2 +- 2 files changed, 16 insertions(+), 16 deletions(-) diff --git a/poetry.lock b/poetry.lock index 59468f9..8cc3580 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1318,17 +1318,17 @@ files = [ [[package]] name = "pkginfo" -version = "1.9.6" +version = "1.10.0" description = "Query metadata from sdists / bdists / installed packages." optional = false python-versions = ">=3.6" files = [ - {file = "pkginfo-1.9.6-py3-none-any.whl", hash = "sha256:4b7a555a6d5a22169fcc9cf7bfd78d296b0361adad412a346c1226849af5e546"}, - {file = "pkginfo-1.9.6.tar.gz", hash = "sha256:8fd5896e8718a4372f0ea9cc9d96f6417c9b986e23a4d116dda26b62cc29d046"}, + {file = "pkginfo-1.10.0-py3-none-any.whl", hash = "sha256:889a6da2ed7ffc58ab5b900d888ddce90bce912f2d2de1dc1c26f4cb9fe65097"}, + {file = "pkginfo-1.10.0.tar.gz", hash = "sha256:5df73835398d10db79f8eecd5cd86b1f6d29317589ea70796994d49399af6297"}, ] [package.extras] -testing = ["pytest", "pytest-cov"] +testing = ["pytest", "pytest-cov", "wheel"] [[package]] name = "platformdirs" @@ -1705,13 +1705,13 @@ certifi = "*" [[package]] name = "pytest" -version = "8.0.2" +version = "8.1.0" description = "pytest: simple powerful testing with Python" optional = false python-versions = ">=3.8" files = [ - {file = "pytest-8.0.2-py3-none-any.whl", hash = "sha256:edfaaef32ce5172d5466b5127b42e0d6d35ebbe4453f0e3505d96afd93f6b096"}, - {file = "pytest-8.0.2.tar.gz", hash = "sha256:d4051d623a2e0b7e51960ba963193b09ce6daeb9759a451844a21e4ddedfc1bd"}, + {file = "pytest-8.1.0-py3-none-any.whl", hash = "sha256:ee32db7af8de4629a455806befa90559f307424c07b8413ccfc30bf5b221dd7e"}, + {file = "pytest-8.1.0.tar.gz", hash = "sha256:f8fa04ab8f98d185113ae60ea6d79c22f8143b14bc1caeced44a0ab844928323"}, ] [package.dependencies] @@ -1719,11 +1719,11 @@ colorama = {version = "*", markers = "sys_platform == \"win32\""} exceptiongroup = {version = ">=1.0.0rc8", markers = "python_version < \"3.11\""} iniconfig = "*" packaging = "*" -pluggy = ">=1.3.0,<2.0" -tomli = {version = ">=1.0.0", markers = "python_version < \"3.11\""} +pluggy = ">=1.4,<2.0" +tomli = {version = ">=1", markers = "python_version < \"3.11\""} [package.extras] -testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "nose", "pygments (>=2.7.2)", "requests", "setuptools", "xmlschema"] +testing = ["argcomplete", "attrs (>=19.2)", "hypothesis (>=3.56)", "mock", "pygments (>=2.7.2)", "requests", "setuptools", "xmlschema"] [[package]] name = "pytest-cov" @@ -1745,13 +1745,13 @@ testing = ["fields", "hunter", "process-tests", "pytest-xdist", "six", "virtuale [[package]] name = "python-dateutil" -version = "2.9.0" +version = "2.9.0.post0" description = "Extensions to the standard Python datetime module" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7" files = [ - {file = "python-dateutil-2.9.0.tar.gz", hash = "sha256:78e73e19c63f5b20ffa567001531680d939dc042bf7850431877645523c66709"}, - {file = "python_dateutil-2.9.0-py2.py3-none-any.whl", hash = "sha256:cbf2f1da5e6083ac2fbfd4da39a25f34312230110440f424a14c7558bb85d82e"}, + {file = "python-dateutil-2.9.0.post0.tar.gz", hash = "sha256:37dd54208da7e1cd875388217d5e00ebd4179249f90fb72437e91a35459a0ad3"}, + {file = "python_dateutil-2.9.0.post0-py2.py3-none-any.whl", hash = "sha256:a8b2bc7bffae282281c8140a97d3aa9c14da0b136dfe83f850eea9a5f7470427"}, ] [package.dependencies] @@ -2450,9 +2450,9 @@ docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.link testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"] [extras] -pydanticv2 = ["pydantic-settings"] +settings = ["pydantic-settings"] [metadata] lock-version = "2.0" python-versions = ">=3.9.10,<3.13" -content-hash = "283bd3605113d5015e2f31632ed94b6f24aadc076e1e9b487d854e326483b647" +content-hash = "990136263ea0f942fc51d3aa453cc9d5658688df950bfe1973fea81ad5308b64" diff --git a/pyproject.toml b/pyproject.toml index f8e37dd..53883d3 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -73,7 +73,7 @@ requests = "^2.31.0" twine = "^4.0.2" pydantic = {version =">=1.10.7"} python-dotenv = "^1.0.1" -pydantic-settings = {version="^2.0.3", optional = true} +pydantic-settings = { version = "^2.0.3", optional = true} tenacity = "^8.2.3" [tool.poetry.extras]