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Empty reads-support when there is only one haplotype #6

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ozagordi opened this issue Aug 21, 2014 · 0 comments
Open

Empty reads-support when there is only one haplotype #6

ozagordi opened this issue Aug 21, 2014 · 0 comments
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@ozagordi
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Nothing is written to reads-support.fas when only one haplotype was sampled in the history. In principle, it should contain that single haplotype with 100% posterior and all reads assigned to it.
@ozagordi ozagordi added the bug label Aug 21, 2014
@ozagordi ozagordi mentioned this issue Feb 23, 2015
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DrYak pushed a commit that referenced this issue Feb 23, 2023
@spaceben
Cleanup shorah_snv and remove amplicon mode (#6)
7625c20 
* [Removed] amplicon mode

* [Added] Cleanup of shorah_snv with new csv format

* [Fixed] Output files and their location

* [Fixed] New output file

* [Fixed] Test except for long_del

* [Fixed] Long deletion test
DrYak pushed a commit that referenced this issue Feb 23, 2023
@LaraFuhrmann
add haplotype_id to co-occurring mutations (#6)
25d4ec6 
Co-authored-by: Lara Fuhrmann <[email protected]>
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