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requirements.txt
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requirements.txt
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anndata==0.10.2 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:2a1724a89f7c8132b19ba78bc15c4abb31059897256aa0f1aca334b802587cd2 \
--hash=sha256:e82e7a79bc41493be47655d3e3376e08597a00a7315c0a03eeffcc3c5e8b288f
anytree==2.10.0 ; python_version >= "3.9" and python_version < "4" \
--hash=sha256:a5e922bef6bb5a154f8d306d37b40ea21885e4143856a9206a14b791cfc26102 \
--hash=sha256:f59680d19bd94f76d8984c5df1fb286085bb1964238b714c6229c5c95d8e55cf
appnope==0.1.3 ; python_version >= "3.9" and python_version < "4.0" and sys_platform == "darwin" \
--hash=sha256:02bd91c4de869fbb1e1c50aafc4098827a7a54ab2f39d9dcba6c9547ed920e24 \
--hash=sha256:265a455292d0bd8a72453494fa24df5a11eb18373a60c7c0430889f22548605e
apted==1.0.3 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:74193369d023649d335269e67c4df07f922959e5ac2597de1b79af4e694150e8 \
--hash=sha256:befa5181e2d4457fa88e54995a82604ee048bb2fbc781ea97d8e1856b4715ce9
array-api-compat==1.4 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:326383f5423716922724199988084250ca41074c7938bed6f9cea95d8d70f833 \
--hash=sha256:d49f00eb66b436cf3a6026d6f43c115d3e058a3a9936536b0bac33dd470e8b4d
arviz==0.16.1 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:35bab9072f66f5a8204d2a71911d09ce05056c177f1a780de53efa2714c27575 \
--hash=sha256:872d1d685719f81a31f94c25278cbaef314df7f6cad0671935f26a006182b8d4
asttokens==2.4.0 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:2e0171b991b2c959acc6c49318049236844a5da1d65ba2672c4880c1c894834e \
--hash=sha256:cf8fc9e61a86461aa9fb161a14a0841a03c405fa829ac6b202670b3495d2ce69
backcall==0.2.0 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:5cbdbf27be5e7cfadb448baf0aa95508f91f2bbc6c6437cd9cd06e2a4c215e1e \
--hash=sha256:fbbce6a29f263178a1f7915c1940bde0ec2b2a967566fe1c65c1dfb7422bd255
biopython==1.81 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:11d673698b3d0d6589292ea951fb62cb24ea27d273eca0d08dbbd956690f97f5 \
--hash=sha256:2cf38112b6d8415ad39d6a611988cd11fb5f33eb09346666a87263beba9614e0 \
--hash=sha256:2f9cfaf16d55ab80d514e7aebe5710dabe4e4ff47ede851031202e33b3249da3 \
--hash=sha256:35506e39822c52d11cf09a3951e82375ca1bb9303960b4286acf02c9a6f6c4cc \
--hash=sha256:3b36ba1bf6395c09a365c53530c9d71f3617763fa2c1d452b3d8948368c0f1de \
--hash=sha256:655df416936662c0c8a06a549cb25e1560e1fea5067d850f34fb714b8a3fae6c \
--hash=sha256:65b93b513ce9dd7b2ce058720eadf42cd03f312db3409356efeb93123d1320aa \
--hash=sha256:6ebfbce0d91796c7aef422ee9dffe8827e07e5abaa94545e006f1f20e965c80b \
--hash=sha256:762c6c43a8486b5fcd07f136a3217b87d24755618b9ea9da1f17124ff44c2ad6 \
--hash=sha256:793c42a376cd63f62f8a088ce39b7dc6b5c55e4e9031d887c434de1595bfa4b8 \
--hash=sha256:7a168709694e10b338718c18d967edd5b56c237dc88642c22275796007a70000 \
--hash=sha256:7c5c07123ff5f44c9e6b5369df854a38afd3c0c50ef58498a0ae8f7eb799f3e8 \
--hash=sha256:811796f8d222aa3869a50e31e54ce62b69106b47cd8bb06934867c0d843297b5 \
--hash=sha256:8bb0c690c7368f255ed45236bf0f5464b476b8c083c8f634533921af78278261 \
--hash=sha256:919a2c583cabf9c96d2ae4e1245a6b0376932fb342aca302a0fc198b71ab3275 \
--hash=sha256:97cbdbed01b2512471f36c74b91658d1dfbdcbf39bc038f6ce5a41c3e60a8fc6 \
--hash=sha256:9ba33244f0eff830beaa7240065bdb5095d96fded6599b76bbb9ddab45cd2bbd \
--hash=sha256:a51d9c1d1b4b634447535da74a644fae59bc234fbbf9001e2dc6b6fbabb98019 \
--hash=sha256:b09efcb4733c8770f25eab5fe555a96a08f5ab9e1bc36939e08ebf2ffbf3e0f1 \
--hash=sha256:b37c0d24191e5c96ca02415a5188551980c83a0d518bbc4ffe3c9a5d1fe0ee81 \
--hash=sha256:ccd729249fd5f586dd4c2a3507c2ea2456825d7e615e97c07c409c850eaf4594 \
--hash=sha256:e41b55edcfd448630e77bf4de66a7235324a8a149621499891da6bd1d5085b9a \
--hash=sha256:ee51bb1cd7decffd24da6b76d5e01b7e2fd818ab85cf0c180226cbb5793a3abd \
--hash=sha256:ef7c79b65b0b3f3c7dc59e20a7f8ae5758d8e852cb8b9cace590dc5617e348ba
click==8.1.7 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:ae74fb96c20a0277a1d615f1e4d73c8414f5a98db8b799a7931d1582f3390c28 \
--hash=sha256:ca9853ad459e787e2192211578cc907e7594e294c7ccc834310722b41b9ca6de
colorama==0.4.6 ; python_version >= "3.9" and python_version < "4.0" and platform_system == "Windows" or python_version >= "3.9" and python_version < "4.0" and sys_platform == "win32" \
--hash=sha256:08695f5cb7ed6e0531a20572697297273c47b8cae5a63ffc6d6ed5c201be6e44 \
--hash=sha256:4f1d9991f5acc0ca119f9d443620b77f9d6b33703e51011c16baf57afb285fc6
coloredlogs==15.0.1 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:612ee75c546f53e92e70049c9dbfcc18c935a2b9a53b66085ce9ef6a6e5c0934 \
--hash=sha256:7c991aa71a4577af2f82600d8f8f3a89f936baeaf9b50a9c197da014e5bf16b0
contourpy==1.1.1 ; python_version >= "3.9" and python_version < "4.0" \
--hash=sha256:059c3d2a94b930f4dafe8105bcdc1b21de99b30b51b5bce74c753686de858cb6 \
--hash=sha256:0683e1ae20dc038075d92e0e0148f09ffcefab120e57f6b4c9c0f477ec171f33 \
--hash=sha256:07d6f11dfaf80a84c97f1a5ba50d129d9303c5b4206f776e94037332e298dda8 \
--hash=sha256:081f3c0880712e40effc5f4c3b08feca6d064cb8cfbb372ca548105b86fd6c3d \
--hash=sha256:0e48694d6a9c5a26ee85b10130c77a011a4fedf50a7279fa0bdaf44bafb4299d \
--hash=sha256:11b836b7dbfb74e049c302bbf74b4b8f6cb9d0b6ca1bf86cfa8ba144aedadd9c \
--hash=sha256:19557fa407e70f20bfaba7d55b4d97b14f9480856c4fb65812e8a05fe1c6f9bf \
--hash=sha256:229a25f68046c5cf8067d6d6351c8b99e40da11b04d8416bf8d2b1d75922521e \
--hash=sha256:24216552104ae8f3b34120ef84825400b16eb6133af2e27a190fdc13529f023e \
--hash=sha256:3b53d5769aa1f2d4ea407c65f2d1d08002952fac1d9e9d307aa2e1023554a163 \
--hash=sha256:3de23ca4f381c3770dee6d10ead6fff524d540c0f662e763ad1530bde5112532 \
--hash=sha256:407d864db716a067cc696d61fa1ef6637fedf03606e8417fe2aeed20a061e6b2 \
--hash=sha256:41339b24471c58dc1499e56783fedc1afa4bb018bcd035cfb0ee2ad2a7501ef8 \
--hash=sha256:462c59914dc6d81e0b11f37e560b8a7c2dbab6aca4f38be31519d442d6cde1a1 \
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--hash=sha256:498e53573e8b94b1caeb9e62d7c2d053c263ebb6aa259c81050766beb50ff8d9 \
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cycler==0.12.1 ; python_version >= "3.9" and python_version < "4.0" \
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cython==3.0.4 ; python_version >= "3.9" and python_version < "4.0" \
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cyvcf2==0.30.22 ; python_version >= "3.9" and python_version < "4.0" \
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datetime==5.2 ; python_version >= "3.9" and python_version < "4.0" \
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decorator==5.1.1 ; python_version >= "3.9" and python_version < "4.0" \
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ete3==3.1.3 ; python_version >= "3.9" and python_version < "4.0" \
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exceptiongroup==1.1.3 ; python_version >= "3.9" and python_version < "3.11" \
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executing==2.0.0 ; python_version >= "3.9" and python_version < "4.0" \
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fonttools==4.43.1 ; python_version >= "3.9" and python_version < "4.0" \
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graphviz==0.20.1 ; python_version >= "3.9" and python_version < "4.0" \
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h5netcdf==1.2.0 ; python_version >= "3.9" and python_version < "4.0" \
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h5py==3.10.0 ; python_version >= "3.9" and python_version < "4.0" \
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humanfriendly==10.0 ; python_version >= "3.9" and python_version < "4.0" \
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importlib-metadata==6.8.0 ; python_version >= "3.9" and python_version < "3.10" \
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importlib-resources==6.1.0 ; python_version >= "3.9" and python_version < "3.10" \
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ipython==8.16.1 ; python_version >= "3.9" and python_version < "4.0" \
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ml-dtypes==0.3.1 ; python_version >= "3.9" and python_version < "4.0" \
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natsort==8.4.0 ; python_version >= "3.9" and python_version < "4.0" \
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networkx==3.1 ; python_version >= "3.9" and python_version < "4.0" \
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numpy==1.25.2 ; python_version >= "3.9" and python_version < "4.0" \
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opt-einsum==3.3.0 ; python_version >= "3.9" and python_version < "4.0" \
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packaging==23.2 ; python_version >= "3.9" and python_version < "4.0" \
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pandas==2.1.1 ; python_version >= "3.9" and python_version < "4.0" \
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parso==0.8.3 ; python_version >= "3.9" and python_version < "4.0" \
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pexpect==4.8.0 ; python_version >= "3.9" and python_version < "4.0" and sys_platform != "win32" \
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pickleshare==0.7.5 ; python_version >= "3.9" and python_version < "4.0" \
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pillow==10.1.0 ; python_version >= "3.9" and python_version < "4.0" \
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prompt-toolkit==3.0.39 ; python_version >= "3.9" and python_version < "4.0" \
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ptyprocess==0.7.0 ; python_version >= "3.9" and python_version < "4.0" and sys_platform != "win32" \
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scikit-learn==1.3.1 ; python_version >= "3.9" and python_version < "4.0" \
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scipy==1.9.3 ; python_version >= "3.9" and python_version < "4.0" \
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scphylo-tools @ git+https://github.com/gordonkoehn/scphylo-tools.git@HEAD ; python_version >= "3.9" and python_version < "4.0"
seaborn==0.12.2 ; python_version >= "3.9" and python_version < "4.0" \
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setuptools-scm==8.0.4 ; python_version >= "3.9" and python_version < "4.0" \
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setuptools==68.2.2 ; python_version >= "3.9" and python_version < "4.0" \
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six==1.16.0 ; python_version >= "3.9" and python_version < "4" \
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sortedcontainers==2.4.0 ; python_version >= "3.9" and python_version < "4.0" \
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stack-data==0.6.3 ; python_version >= "3.9" and python_version < "4.0" \
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termcolor==2.3.0 ; python_version >= "3.9" and python_version < "4.0" \
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threadpoolctl==3.2.0 ; python_version >= "3.9" and python_version < "4.0" \
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tomli==2.0.1 ; python_version >= "3.9" and python_version < "3.11" \
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tqdm==4.66.1 ; python_version >= "3.9" and python_version < "4.0" \
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traitlets==5.11.2 ; python_version >= "3.9" and python_version < "4.0" \
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typing-extensions==4.8.0 ; python_version >= "3.9" and python_version < "4.0" \
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tzdata==2023.3 ; python_version >= "3.9" and python_version < "4.0" \
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wcwidth==0.2.8 ; python_version >= "3.9" and python_version < "4.0" \
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xarray-einstats==0.6.0 ; python_version >= "3.9" and python_version < "4.0" \
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xarray==2023.9.0 ; python_version >= "3.9" and python_version < "4.0" \
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zipp==3.17.0 ; python_version >= "3.9" and python_version < "3.10" \
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zope-interface==6.1 ; python_version >= "3.9" and python_version < "4.0" \
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