python-package.yml

# This workflow will install the ml4h Python package and run its tests.
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: Test ml4h Python package

on:
  workflow_dispatch:
    # Allows manually triggering workflow in GitHub UI on selected branch.
    # GitHub doc: https://docs.github.com/en/free-pro-team@latest/actions/reference/events-that-trigger-workflows#workflow_dispatch.
    # GitHub blog demo: https://github.blog/changelog/2020-07-06-github-actions-manual-triggers-with-workflow_dispatch/.

  push:
    branches: [ master ]

  pull_request:
    branches: [ master ]

jobs:
  build:

    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: [3.7, 3.8, 3.9]

    steps:
    - uses: actions/checkout@v2
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v2
      with:
        python-version: ${{ matrix.python-version }}
    - name: Install dependencies
      run: |
        python -m pip install --upgrade pip
        # Install the ml4h Python package.
        pip install .
        pip install -r docker/vm_boot_images/config/tensorflow-requirements.txt
    - name: Test with pytest
      run: |
        pytest tests -m "not slow"