You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I'm testing gatk4.3 against 3 WES samples. For less time comsuption, I scattered the bed file into 45 small interval list. But an error prompted out in the GermlineCNVCaller step with the err below:
@lovelycatZ The problem is most likely a mismatch between the version of GATK you're running, and the version of the GCNV kernel installed in your Python environment. Please try running either within the official GATK conda environment distributed with your version of GATK in the gatkcondaenv.yml file, or within the corresponding docker image at https://hub.docker.com/r/broadinstitute/gatk/.
Hello,
I'm testing gatk4.3 against 3 WES samples. For less time comsuption, I scattered the bed file into 45 small interval list. But an error prompted out in the GermlineCNVCaller step with the err below:
The text was updated successfully, but these errors were encountered: