The repository contains scripts and data used to identify and analyze transmembrane transcription regulators (TTRs).
getTTRs.py - get TTRs from MiST using its API.
getTTR_tm_regions.py - get transmembrane region sequences and coordinates.
getTTR_st_statistics.py - get TTR and other signal transduction protein counts.
TTR_TM_surface_area.py - calculate the length and surface area of transmembrane regions.
Publication: Demey, L.M.#, Gumerov, V.M.#, Xing, J., Zhulin, I.B, DiRita, V.J. Transmembrane Transcription Regulators are widespread in Bacteria and Archaea. Microbiology Spectrum
# - co-first author with equal contribution