From ebd80196db2b92f16d0572b6aae07572c3812c50 Mon Sep 17 00:00:00 2001
From: gbayarri <genis.bayarri@irbbarcelona.org>
Date: Tue, 12 Mar 2024 16:10:35 +0100
Subject: [PATCH] Added references

---
 .github/workflows/linting_and_testing.yml |  1 +
 references.html                           | 78 +++++++++++++++++++++++
 2 files changed, 79 insertions(+)
 create mode 100644 references.html

diff --git a/.github/workflows/linting_and_testing.yml b/.github/workflows/linting_and_testing.yml
index b297edb..b5fdec7 100644
--- a/.github/workflows/linting_and_testing.yml
+++ b/.github/workflows/linting_and_testing.yml
@@ -10,6 +10,7 @@ on:
       - 'LICENSE'
       - 'setup.py'
       - 'README.md'
+      - 'references.html'
       - '**/docs/**'
       - '**/json_schemas/**'
 
diff --git a/references.html b/references.html
new file mode 100644
index 0000000..e21b634
--- /dev/null
+++ b/references.html
@@ -0,0 +1,78 @@
+<script type="application/ld+json">
+  {
+    "@context": "http://schema.org",
+    "@type": "SoftwareApplication",
+    "description": "DrugBank is a comprehensive online database that provides information about the molecular and pharmacological aspects of drugs.",
+    "name": "DrugBank",
+    "url": "https://go.drugbank.com/",
+    "applicationCategory": "Drug database",
+    "citation": "http://www.ncbi.nlm.nih.gov/pubmed/37953279",
+    "license": "other",
+    "softwareVersion": "6.0"
+  }
+</script>
+<script type="application/ld+json">
+  {
+    "@context": "http://schema.org",
+    "@type": "SoftwareApplication",
+    "description": "AlphaFold Protein Structure Database.",
+    "name": "AlphaFold",
+    "url": "https://alphafold.ebi.ac.uk/",
+    "applicationCategory": "Protein Structure Database",
+    "citation": "https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkab1061/6430488",
+    "license": "https://creativecommons.org/licenses/by/4.0/",
+    "softwareVersion": "2.3.2"
+  }
+</script>
+<script type="application/ld+json">
+  {
+    "@context": "http://schema.org",
+    "@type": "SoftwareApplication",
+    "description": "PDBe's REST API is a programmatic way to obtain information from the PDB. You can access details about sample, experiment, models, compounds, cross-references, publications, quality, assemblies and more.",
+    "name": "Protein Data Bank in Europe (PDBe)",
+    "url": "https://www.ebi.ac.uk/pdbe/pdbe-rest-api",
+    "applicationCategory": "Protein Structure Database",
+    "citation": "http://dx.doi.org/10.1093/nar/gkz990",
+    "license": "https://creativecommons.org/licenses/by/4.0/",
+    "softwareVersion": "1.0"
+  }
+</script>
+<script type="application/ld+json">
+  {
+    "@context": "http://schema.org",
+    "@type": "SoftwareApplication",
+    "description": "RCSB Protein Data Bank (RCSB PDB) enables breakthroughs in science and education by providing access and tools for exploration, visualization, and analysis.",
+    "name": "RCSB PDB",
+    "url": "https://www.rcsb.org/",
+    "applicationCategory": "Protein Structure Database",
+    "citation": "https://doi.org/10.1093/nar/28.1.235",
+    "license": "https://creativecommons.org/licenses/by/4.0/",
+    "softwareVersion": "3.1"
+  }
+</script>
+<script type="application/ld+json">
+  {
+    "@context": "http://schema.org",
+    "@type": "SoftwareApplication",
+    "description": "MemProtMD is a database of over 7000 intrinsic membrane protein structures identified in the Protein Data Bank, inserted into simulated lipid bilayers using Coarse-Grained Self Assembly Molecular Dynamics simulations.",
+    "name": "MemProtMD",
+    "url": "http://memprotmd.bioch.ox.ac.uk/",
+    "applicationCategory": "Membrane Protein Structure Database",
+    "citation": "http://dx.doi.org/10.1093/nar/gky1047",
+    "license": "https://creativecommons.org/licenses/by/4.0/",
+    "softwareVersion": "1.0"
+  }
+</script>
+<script type="application/ld+json">
+  {
+    "@context": "http://schema.org",
+    "@type": "SoftwareApplication",
+    "description": "UniProt is the world's leading high-quality, comprehensive and freely accessible resource of protein sequence and functional information.",
+    "name": "UniProt",
+    "url": "https://www.uniprot.org/",
+    "applicationCategory": "Protein Sequence Database",
+    "citation": "https://doi.org/10.1093/nar/gkac1052",
+    "license": "https://creativecommons.org/licenses/by/4.0/",
+    "softwareVersion": "1.0"
+  }
+</script>
\ No newline at end of file