diff --git a/README.md b/README.md index 5603108..ba7460b 100644 --- a/README.md +++ b/README.md @@ -173,7 +173,7 @@ The methods can be used directly through the command line after install: hdf5_fp32 : HFD5 format, using fp32 precision. hdf5_fp64 : HFD5 format, using fp64 precision. --subsample-depth Depth of subsampling of the input BIOM before computing unifrac (required for mode==multi, optional for one-off) - --subsample-replacement [OPTIONAL] Subsample qith or without replacement (default is with) + --subsample-replacement [OPTIONAL] Subsample with or without replacement (default is with) --n-subsamples [OPTIONAL] if mode==multi, number of subsampled UniFracs to compute (default: 100) --permanova [OPTIONAL] Number of PERMANOVA permutations to compute (default: 999 with -g, do not compute if 0) --pcoa [OPTIONAL] Number of PCoA dimensions to compute (default: 10, do not compute if 0) diff --git a/src/su.cpp b/src/su.cpp index e79b5e9..47a70e3 100644 --- a/src/su.cpp +++ b/src/su.cpp @@ -49,7 +49,7 @@ void usage() { std::cout << " \t\t hdf5_fp64 : HFD5 format, using fp64 precision." << std::endl; std::cout << " \t\t hdf5_nodist : HFD5 format, no distance matrix. (default if mode==multi)" << std::endl; std::cout << " --subsample-depth\tDepth of subsampling of the input BIOM before computing unifrac (required for mode==multi, optional for one-off)" << std::endl; - std::cout << " --subsample-replacement\t[OPTIONAL] Subsample qith or without replacement (default is with)" << std::endl; + std::cout << " --subsample-replacement\t[OPTIONAL] Subsample with or without replacement (default is with)" << std::endl; std::cout << " --n-subsamples\t[OPTIONAL] if mode==multi, number of subsampled UniFracs to compute (default: 100)" << std::endl; std::cout << " --permanova\t[OPTIONAL] Number of PERMANOVA permutations to compute (default: 999 with -g, do not compute if 0)" << std::endl; std::cout << " --pcoa\t[OPTIONAL] Number of PCoA dimensions to compute (default: 10, do not compute if 0)" << std::endl;