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comp_labs.Rmd
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---
title: "Computer Labs"
output: html_document
---
<br>
### Meeting days & times
Thursday from 3:00-3:50 via Zoom
### Lab book
You can find the electronic lab book [here](https://nwfsc-timeseries.github.io/atsa-labs).
```{r setup, include=FALSE}
knitr::opts_chunk$set(echo = TRUE)
```
```{r include=FALSE}
library(kableExtra)
load("syllabus.RData")
```
```{r topics, include = FALSE}
lab_topics <- lapply(week_labs, function(x){if(is.list(x)){x$topics}else{""}})
## topics formatted for html
lab_topics_html <- sapply(lapply(lab_topics, paste, "<br>", collapse=""), c)
names(lab_topics_html) <- NULL
```
<!-- first is PDF, 2nd PPT, 3rd Rmd -->
```{r lec_links, include = FALSE}
# lab_links <- lapply(week_labs, function(x){if(is.list(x)){c(x$pdf, x$rmd)}else{""}})
# ## topics formatted for html
# lab_links_html <- sapply(lapply(lab_links, function(x){ tmp1<-c("[PDF](","[Rmd]("); tmp2 <- c(")",")"); tmp1[x==""]=""; tmp2[x==""]=""; tmp <- paste(tmp1,x,tmp2); tmp=paste(tmp,collapse="<br>"); tmp}), c)
# names(lab_links_html) <- NULL
lab_links1 <- lapply(week_labs, function(x){if(is.list(x)){c(x$rmd)}else{""}})
lab_links1_html <- sapply(lapply(lab_links1, function(x){
tmp1<-paste0("[Rmd ",1:length(x),"]("); tmp2 <- ")"; tmp <- paste(tmp1,x,tmp2); tmp[x==""]=""; tmp=paste(tmp, collapse=" "); tmp}), c)
lab_links2 <- lapply(week_labs, function(x){if(is.list(x)){c(x$pdf)}else{""}})
lab_links2_html <- sapply(lapply(lab_links2, function(x){
tmp1<-paste0("[PDF ",1:length(x),"]("); tmp2 <- ")"; tmp <- paste(tmp1,x,tmp2); tmp[x==""]=""; tmp=paste(tmp, collapse=" "); tmp}), c)
lab_links3 <- lapply(week_labs, function(x){if(is.list(x)){c(x$html)}else{""}})
lab_links3_html <- sapply(lapply(lab_links3, function(x){
tmp1<-paste0("[html ",1:length(x),"]("); tmp2 <- ")"; tmp <- paste(tmp1,x,tmp2); tmp[x==""]=""; tmp=paste(tmp, collapse=" "); tmp}), c)
lab_links_html <- lab_links3_html
for(i in 1:length(lab_links3_html)){
lab_links_html[i] <- paste( lab_links3_html[i], lab_links2_html[i], lab_links1_html[i], sep="<br>")
}
names(lab_links_html) <- NULL
```
```{r video_links, include = FALSE}
vid_links <- lapply(week_labs, function(x){if(is.list(x)){x$video}else{""}})
## topics formatted for html
vid_links_html <- sapply(lapply(vid_links, function(x){
tmp1<-"[Video]("; tmp2 <- ")"; tmp <- paste(tmp1,x,tmp2); tmp[x==""]=""; tmp=paste(tmp,collapse="<br>"); tmp}), c)
names(vid_links_html) <- NULL
```
```{r youtube_links, include = FALSE}
youtube_links <- lapply(week_labs, function(x){
if(is.list(x)){x$youtube}else{""}})
## topics formatted for html
youtube_links_html <- sapply(lapply(youtube_links, function(x){ tmp1<-"[YouTube]("; tmp2 <- ")"; tmp <- paste(tmp1,x,tmp2); tmp[x==""]=""; tmp=paste(tmp,collapse="<br>"); tmp}), c)
names(youtube_links_html) <- NULL
```
```{r data_links, include = FALSE}
data_links <- lapply(week_labs, function(x){if(is.list(x)){x$data}else{""}})
## topics formatted for html
data_links_html <- sapply(lapply(data_links, function(x){ tmp1<-paste("[",x,"]("); tmp2 <- rep(")",length(x)); tmp1[x==""]=""; tmp2[x==""]=""; tmp <- paste(tmp1,x,tmp2); tmp=paste(tmp,collapse="<br>"); tmp}), c)
names(data_links_html) <- NULL
```
```{r homework, include = FALSE}
hw_links <- lapply(week_labs, function(x){if(is.list(x)){x$homework}else{""}})
## topics formatted for html
hw_links_html <- sapply(lapply(hw_links, paste, "<br>", collapse=""), c)
names(hw_links_html) <- NULL
```
```{r duedate, include = FALSE}
duedate_links <- lapply(week_labs, function(x){if(is.list(x)){x$hw_duedate}else{""}})
## topics formatted for html
dd_links_html <- sapply(lapply(duedate_links, paste, "<br>", collapse=""), c)
names(dd_links_html) <- NULL
```
```{r key_links, include = FALSE}
key_links <- lapply(week_labs, function(x){if(is.list(x)){c(x$key)}else{""}})
key_links_html <- sapply(lapply(key_links, function(x){
if(length(x)>1){
tmp1<-paste0("[Key ",1:length(x),"](") }else{ tmp1<-"[Key](" }; tmp2 <- ")"; tmp <- paste(tmp1,x,tmp2); tmp[x==""]=""; tmp=paste(tmp, collapse=" "); tmp}), c)
names(key_links_html) <- NULL
```
```{r instructors, include = FALSE}
instructors <- lapply(week_labs, function(x){if(is.list(x)){x$instructor}else{""}})
## topics formatted for html
instructor_html <- sapply(lapply(instructors, paste, "<br>", collapse=""), c)
names(instructor_html) <- NULL
```
```{r generate_table, echo=FALSE}
## data frame with dates & topics
syl_txt <- data.frame(
date = qtr,
instructor = instructor_html,
lab_topics = lab_topics_html,
lab_links = lab_links_html,
#data_links = data_links_html,
vid_links = vid_links_html,
#youtube_links = youtube_links_html,
hw_links = hw_links_html,
duedate_links = dd_links_html,
key_links = key_links_html
)
colnames(syl_txt) <- c("Date", "Instructor", "Topics", "Lab Material",
"Video", "Homework", "Due Date", "Key")
## generate table
kable(syl_txt, format = "html", caption = " ",
align = "cclccccc", escape = FALSE) %>%
kable_styling(bootstrap_options = "striped",
full_width = F,
position = "left") %>%
column_spec(1, width = "8em") %>%
scroll_box(height = "700px", extra_css = "border-style: none;")
```