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Tables under consideration for extraction to API #2

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spapa013 opened this issue Oct 29, 2024 · 0 comments
Open

Tables under consideration for extraction to API #2

spapa013 opened this issue Oct 29, 2024 · 0 comments

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@spapa013
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spapa013 commented Oct 29, 2024 •
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RapidTune

(Occurs prior to raster/ motion correction)

  • Dotmapping
  • Monitor Calibration
  • Retinotopy
  • Oracle map

PixelTune

(Occurs after raster/ motion correction)

  • All of Rapidtune
  • Ori Tune

Pupil

  • To be discussed

Treadmill

  • To be discussed

Stimulus

  • To be discussed

Meso

meso-ERD

Extraction in progress

  • Raster Correction
  • Motion Correction
  • Segmentation

Pending Extraction

  • Quality
  • SummaryImages
  • Fluorescence
  • MaskClassification
  • Activity
  • AreaMembership
  • Func2StructMatching
  • StackCoordinates
  • ProximityCellMatching

Table list

  • Version
  • ScanInfo
    • ScanInfo.Field
  • FieldAnnotation
  • Quality
    • Quality.MeanIntensity
    • Quality.SummaryFrames
    • Quality.Contrast
    • Quality.QuantalSize
    • Quality.EpileptiformEvents
  • CorrectionChannel
  • RasterCorrection
  • MotionMethodForScan
  • MotionCorrection
    • MotionCorrection.MotionMethodUsed
  • SummaryImages
    • SummaryImages.Average
    • SummaryImages.Correlation
    • SummaryImages.L6Norm
  • SegmentationTask
  • DoNotSegment
  • Segmentation
    • Segmentation.Mask
    • Segmentation.Manual
    • Segmentation.CNMF
    • Segmentation.CNMFBackground
  • Fluorescence
  • Fluorescence.Trace
  • MaskClassification
  • MaskClassification.Type
  • ScanSet
    • ScanSet.Unit
    • ScanSet.UnitInfo
  • Activity
    • Activity.Trace
    • Activity.ARCoefficients
  • ScanDone
    • ScanDone.Partial
  • StackCoordinates
    • StackCoordinates.UnitInfo
  • AreaMembership
    • AreaMembership.UnitInfo
  • Func2StructMatching
    • Func2StructMatching.AllMatches
    • Func2StructMatching.Match
  • SourceUnitsToMatch
  • ScansToMatch
  • ProximityCellMatch
  • BestProximityCellMatch

Stack

stack-ERD

  • StackInfo
    • StackInfo.ROI
  • Quality
    • Quality.MeanIntensity
    • Quality.SummaryFrames
    • Quality.Contrast
  • CorrectionChannel
  • RasterCorrection
  • MotionCorrection
  • Stitching
    • Stitching.Volume
    • Stitching.ROICoordinates
  • CorrectedStack
    • CorrectedStack.Slice
  • CorrelationStack
    • CorrelationStack.Slice
  • PreprocessedStack
  • Surface
  • SegmentationTask
  • Segmentation
    • Segmentation.ConvNet
  • RegistrationTask
  • Registration
    • Registration.Rigid
    • Registration.Affine
    • Registration.NonRigid
    • Registration.Params
  • FieldSegmentation
    • FieldSegmentation.StackUnit
  • RegistrationOverTime
    • RegistrationOverTime.Chunk
    • RegistrationOverTime.Rigid
    • RegistrationOverTime.Affine
    • RegistrationOverTime.NonRigid
    • RegistrationOverTime.Params
  • Drift
  • StackSet
    • StackSet.Unit
    • StackSet.Match
    • StackSet.MatchedUnit
  • Area
    • Area.Mask
@spapa013 spapa013 changed the title Tables under consideration for extracting to API Tables under consideration for extraction to API Oct 29, 2024
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