Dockerfile.pagan2libs

FROM ubuntu:14.04
RUN apt-get update && apt-get install -y \
	autoconf \
	automake \
	build-essential \
	gcc \
	g++ \
	wget \
	zlib1g \
	zlib1g-dev

RUN mkdir /build /pagan2
WORKDIR /build

RUN wget http://sourceforge.net/projects/boost/files/boost/1.58.0/boost_1_58_0.tar.gz && \
	tar xzf boost_1_58_0.tar.gz

WORKDIR /build/boost_1_58_0

RUN sh ./bootstrap.sh --prefix=/pagan2/boost --with-libraries=program_options,regex,system,thread && \
	echo "using gcc : 4.8 : /usr/bin/g++-4.8 ; " >> tools/build/src/user-config.jam && \
	./bjam --toolset=gcc-4.8 threading=multi link=static --prefix=/pagan2/boost install

WORKDIR /build
RUN wget ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/ARCHIVE/12_0_0/ncbi_cxx--12_0_0.tar.gz && \
	tar xzf ncbi_cxx--12_0_0.tar.gz

WORKDIR /build/ncbi_cxx--12_0_0

RUN ./configure --prefix=/pagan/ncbi --without-debug --without-check --without-dll --without-gui \
	--with-optimization --with-mt --with-64 --with-boost=/pagan2/boost 

RUN	cd GCC480-ReleaseMT64/build && make all_r -j4

ENV SOURCE /build/ncbi_cxx--12_0_0/GCC480-ReleaseMT64
ENV TARGET /pagan2/ncbi/GCC480-ReleaseMT64

RUN mkdir -p "$TARGET" && mv "$SOURCE/lib" "$TARGET" && mv "$SOURCE/inc" "$TARGET" && \
	mv "$SOURCE/../include" "$TARGET/.."

RUN echo "#define HAVE_IS_SORTED 1" >> "$TARGET/inc/ncbiconf_unix.h"

RUN apt-get update && apt-get install -y \
	git \
	libtool

WORKDIR /build
RUN git clone https://github.com/curl/curl.git
WORKDIR /build/curl

RUN ./buildconf 
RUN ./configure --prefix=/pagan2/curl --disable-shared --without-ssl --enable-static  --disable-ldap --disable-sspi
RUN make && make install

WORKDIR /
RUN rm -r /build