[PATCH] fatal error: numpy/arrayobject.h: No such file or director

[npinto]

% python setup.py build_ext                                                                                                                                                                                                                                                                                         running build_ext
skipping 'pydeconv/utils.c' Cython extension (up-to-date)
building 'pydeconv.utils' extension
C compiler: x86_64-pc-linux-gnu-gcc -pthread -fPIC

compile options: '-I/usr/include/python2.7 -c'
x86_64-pc-linux-gnu-gcc: pydeconv/utils.c
pydeconv/utils.c:275:31: fatal error: numpy/arrayobject.h: No such file or directory
compilation terminated.
pydeconv/utils.c:275:31: fatal error: numpy/arrayobject.h: No such file or directory
compilation terminated.
error: Command "x86_64-pc-linux-gnu-gcc -pthread -fPIC -I/usr/include/python2.7 -c pydeconv/utils.c -o build/temp.linux-x86_64-2.7/pydeconv/utils.o" failed with exit status 1

The following patch fixes the issue:

diff --git a/setup.py b/setup.py
index 2a4cb41..ca53743 100644
--- a/setup.py
+++ b/setup.py
@@ -3,9 +3,11 @@
 from distutils.core import setup
 from distutils.extension import Extension
 from Cython.Distutils import build_ext
+from numpy.distutils.misc_util import get_numpy_include_dirs

 ext_modules = [
     Extension("pydeconv.utils", ["pydeconv/utils.pyx"],
+    include_dirs=get_numpy_include_dirs(),
     ),
 ]

HTH