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DESCRIPTION
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DESCRIPTION
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Package: CellChat
Type: Package
Title: Inference and analysis of cell-cell communication from single-cell transcriptomics data
Version: 0.0.2
Author: Suoqin Jin
Maintainer: Suoqin Jin <[email protected]>
Description: an open source R package that infers, visualizes and analyzes the cell-cell communication networks from scRNA-seq data.
Depends: R (>= 3.5.0)
License: GPL-3
Encoding: UTF-8
LazyData: true
Imports:
future,
future.apply,
pbapply,
irlba,
ggplot2,
igraph,
NMF,
ggalluvial,
stringr,
dplyr,
svglite,
Matrix,
expm,
Rtsne,
ggrepel,
circlize,
RColorBrewer,
cowplot,
methods,
ComplexHeatmap,
RSpectra,
Rcpp,
RcppEigen,
reticulate,
scales,
sna,
forcats,
reshape2,
FNN,
shape,
extrafont
Remotes: jokergoo/ComplexHeatmap, sqjin/NMF
LinkingTo: Rcpp, RcppEigen
Suggests:
rmarkdown, knitr, roxygen2
RoxygenNote: 7.0.2
VignetteBuilder: knitr