setup.cfg

[metadata]
name = cispliceai
version = 1.1.0
description = CI-SpliceAI: Predicting splicing disruptions, trained on all isoforms
long_description = file: README.md
long_description_content_type = text/markdown
keywords = splicing, rna, machine learning, SpliceAI
url = https://ci-spliceai.com
author = Yaron Strauch
author_email = git@yaron-strauch.com
license = CC BY 4.0
license_files = LICENSE

[options]
packages = find:
install_requires =
    keras>=2.4.0,<3
    pyfaidx>=0.5.0
    numpy>=1
    pandas>=1
    pysam>=0.10
    # biopython>=1.73 # only needed for .fa.gz files which users can install themselves if required
    ; python_version == "3"

[options.extras_require]
cpu = tensorflow>=1.15.0
gpu = tensorflow-gpu>=1.15.0

[options.package_data]
cispliceai = data/*

[options.entry_points]
console_scripts =
    cis-vcf=cispliceai.console:vcf
    cis-json=cispliceai.console:json