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pgsc_calc.json
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{
"pgsc_calc.vcf": [
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr1.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr2.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr3.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr4.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr5.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr6.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr7.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr8.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr9.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr10.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr11.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr12.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr13.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr14.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr15.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr16.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr17.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr18.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr19.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr20.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr21.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz",
"gs://terra-featured-workspaces/GWAS/1kg-genotypes/vcf/ALL.chr22.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf.bgz"
],
"pgsc_calc.chromosome": ["1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22"],
"pgsc_calc.target_build": "GRCh37",
"pgsc_calc.pgs_id": ["PGS001229", "PGS000802"],
"pgsc_calc.run_ancestry": true,
"pgsc_calc.ref_panel": "gs://fc-a8511200-791a-4375-bccf-fbe41ac3f9f6/pgsc_HGDP+1kGP_v1.tar.zst"
}