clean up jar files referenced by installer vs. git repository

[cseppan]

The table below compares the contents of the listing file files.txt, the contents of the lib directory on the installer site, and the lib directory checked into git.

/lib/ files.txt	web lib dir	git EMF lib dir	same	required by client	notes
activation.jar	activation.jar	activation.jar	X
analysis-engine.jar	analysis-engine.jar	analysis-engine.jar	X	X
antlr-2.7.5H3.jar	antlr-2.7.5H3.jar		all antlr files are same
	antlr-2.7.6.jar	antlr-2.7.6.jar	X
		aopalliance-1.0.jar
asm-attrs.jar	asm-attrs.jar	asm-attrs.jar	X
asm.jar	asm.jar	asm.jar	X
		axis-1.4
axis-ant.jar	axis-ant.jar	axis-ant.jar.old	X		remove from files.txt
axis.jar	axis.jar	axis-1.4/axis.jar	X	X
		axis2-jaxws-1.5.1.jar
	AXIS_log4j.properties	AXIS_log4j.properties			remove
	c3p0-0.9.0.2.jar				remove
c3p0-0.9.1.2.jar	c3p0-0.9.1.2.jar		9.1.2 and 9.2 are same
	c3p0-0.9.2-pre1.jar	c3p0-0.9.2-pre1.jar	X
cglib-2.1.jar	cglib-2.1.jar	cglib-2.1.jar	X
cleanimports.jar	cleanimports.jar	cleanimports.jar	X
colt.jar	colt.jar	colt.jar	X	X
commons-collections-3.1.jar	commons-collections-3.1.jar	commons-collections-3.1.jar	X
commons-discovery-0.2.jar	commons-discovery-0.2.jar	commons-discovery-0.2.jar	X	X
commons-fileupload-1.3.2.jar	commons-fileupload-1.3.2.jar	commons-fileupload-1.3.2.jar	X	X
		commons-io-2.5.jar
		commons-lang-2.1.jar
commons-logging-1.0.4.jar	commons-logging-1.0.4.jar	commons-logging-1.0.4.jar	X	X
commons-primitives-1.0.jar	commons-primitives-1.0.jar	commons-primitives-1.0.jar	X	X
concurrent.jar	concurrent.jar	concurrent.jar	X
connector.jar	connector.jar	connector.jar	X
cosu.jar	cosu.jar	cosu.jar	X
		dev
dom4j-1.6.jar	dom4j-1.6.jar	dom4j-1.6.1.jar	!
ehcache-1.1.jar	ehcache-1.1.jar	ehcache-1.1.jar	X
epa-commons.jar	epa-commons.jar	epa-commons.jar	X	X
fluent-hc-4.2.5.jar	fluent-hc-4.2.5.jar	fluent-hc-4.2.5.jar	X
guava-10.0.1.jar	guava-10.0.1.jar	guava-10.0.1.jar	X	X
hibernate3.jar	hibernate3.jar	hibernate3.jar	X
httpasyncclient-4.0-beta3.jar	httpasyncclient-4.0-beta3.jar	httpasyncclient-4.0-beta3.jar	X	X
httpclient-4.2.5.jar	httpclient-4.2.5.jar	httpclient-4.2.5.jar	X	X
httpcore-4.2.4.jar	httpcore-4.2.4.jar	httpcore-4.2.4.jar	X	X
httpcore-nio-4.2.2.jar	httpcore-nio-4.2.2.jar	httpcore-nio-4.2.2.jar	X	X
iText-5.0.1.jar	iText-5.0.1.jar	iText-5.0.1.jar	X	X
java_cup.jar	java_cup.jar	java_cup.jar	!	X
		java_cup.jar.old	!
javassist-3.9.0.GA.jar	javassist-3.9.0.GA.jar	javassist-3.9.0.GA.jar	X
jaxrpc.jar	jaxrpc.jar	axis-1.4/jaxrpc.jar	X	X
jgraphx.jar	jgraphx.jar	jgraphx.jar	X	X
jh.jar	jh.jar	jh.jar	X	X
jlfgr-1_0.jar	jlfgr-1_0.jar	jlfgr-1_0.jar	X	X
jnlp.jar	jnlp.jar	jnlp.jar	X
	jta-1.1.jar	jta-1.1.jar	!
jta.jar	jta.jar		!
kmlGenerator.jar	kmlGenerator.jar	kmlGenerator.jar	X	X
log4j-1.2.17-rhel.jar	log4j-1.2.17-rhel.jar	log4j-1.2.17-rhel.jar	X
mail.jar	mail.jar	mail.jar	X	X
mchange-commons-0.2.jar	mchange-commons-0.2.jar	mchange-commons-0.2.jar	X
oscache-2.1.jar	oscache-2.1.jar	oscache-2.1.jar	X
	persistence-api-1.0.2.jar	persistence-api-1.0.2.jar	X	unused import in ControlStrategyManagerView
proxool-0.8.3.jar	proxool-0.8.3.jar	proxool-0.8.3.jar	X
rsyntaxtextarea-3.0.0-SNAPSHOT.jar	rsyntaxtextarea-3.0.0-SNAPSHOT.jar	rsyntaxtextarea-3.0.0-SNAPSHOT.jar	X	X
saaj-api.jar	saaj-api.jar
saaj-impl.jar	saaj-impl.jar
saaj.jar	saaj.jar	axis-1.4/saaj.jar	!	X
slf4j-api-1.6.1.jar	slf4j-api-1.6.1.jar	slf4j-api-1.6.1.jar	X
slf4j-nop-1.6.1.jar	slf4j-nop-1.6.1.jar	slf4j-nop-1.6.1.jar	X
		spring-aop-3.2.4.RELEASE.jar
		spring-aspects-3.2.4.RELEASE.jar
		spring-beans-3.2.4.RELEASE.jar
		spring-context-3.2.4.RELEASE.jar
		spring-core-3.2.4.RELEASE.jar
		spring-dao-2.0.8.jar
		spring-expression-3.2.4.RELEASE.jar
		spring-hibernate3-2.0.8.jar
		spring-jdbc-3.2.4.RELEASE.jar
		spring-orm-3.2.4.RELEASE.jar
		spring-tx-3.2.4.RELEASE.jar
		spring-web-3.2.4.RELEASE.jar
soap.jar	soap.jar
swarmcache-1.0rc2.jar	swarmcache-1.0rc2.jar	swarmcache-1.0rc2.jar	X
		tomcat
versioncheck.jar	versioncheck.jar	versioncheck.jar	X
weka.jar	weka.jar	weka.jar	X	X
wsdl4j-1.5.1.jar	wsdl4j-1.5.1.jar	axis-1.4/wsdl4j-1.5.1.jar	X	X
xercesImpl.jar	xercesImpl.jar	xerces-2.10.0/xercesImpl.jar	X
xercesSamples.jar	xercesSamples.jar
xml-apis.jar	xml-apis.jar	xerces-2.10.0/xml-apis.jar	X
xmlParserAPIs.jar	xmlParserAPIs.jar
xstream-1.2.1.jar	xstream-1.2.1.jar	xstream-1.2.1.jar	X	X