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Issue with dependencies in installing into conda env #19

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arnoldchang1 opened this issue May 30, 2023 · 0 comments
Open

Issue with dependencies in installing into conda env #19

arnoldchang1 opened this issue May 30, 2023 · 0 comments

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@arnoldchang1
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Hello! Thank you for the great work in benchmarking the most popular methods for spot deconvolution. It was really helpful reading the paper. We are trying to validate the results but it seems that many software packages are unavailable to download such as RCTD - the version specified is 1.2.0 but that is not a valid tag to install into conda env. Installing the latest RCTD version produces error probably due to dependencies-related issues.

Do you have any guidance on how to proceed? Ideally having one conda environment to execute all methods. Thank you so much!
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@arnoldchang1