diff --git a/_toc.yml b/_toc.yml index c4a8e03..468060e 100644 --- a/_toc.yml +++ b/_toc.yml @@ -12,6 +12,7 @@ parts: - caption: Example workflows chapters: - file: notebooks/example-workflows/ecs-cmip6 + - file: notebooks/example-workflows/enso-esgf - file: notebooks/example-workflows/gmst - file: notebooks/example-workflows/precip-freq - file: notebooks/example-workflows/xesmf-ohu diff --git a/notebooks/example-workflows/enso-esgf.ipynb b/notebooks/example-workflows/enso-esgf.ipynb index 95ca845..2e87e85 100644 --- a/notebooks/example-workflows/enso-esgf.ipynb +++ b/notebooks/example-workflows/enso-esgf.ipynb @@ -58,1125 +58,12 @@ }, { "cell_type": "code", - "execution_count": 1, + "execution_count": null, "id": "52bcfa1a-3907-446d-b384-29e97b5c8cb9", "metadata": { "tags": [] }, - "outputs": [ - { - "data": { - "application/javascript": [ - "(function(root) {\n", - " function now() {\n", - " return new Date();\n", - " }\n", - "\n", - " var force = true;\n", - " var py_version = 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url);\n", - " }\n", - "\n", - " var skip = [];\n", - " if (window.requirejs) {\n", - " window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 'https://cdn.jsdelivr.net/npm/gridstack@7.2.3/dist/gridstack-all', 'notyf': 'https://cdn.jsdelivr.net/npm/notyf@3/notyf.min'}, 'shim': {'jspanel': {'exports': 'jsPanel'}, 'gridstack': {'exports': 'GridStack'}}});\n", - " require([\"jspanel\"], function(jsPanel) {\n", - "\twindow.jsPanel = jsPanel\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-modal\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-tooltip\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-hint\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-layout\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-contextmenu\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-dock\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"gridstack\"], function(GridStack) {\n", - "\twindow.GridStack = GridStack\n", - "\ton_load()\n", - " })\n", - " require([\"notyf\"], function() {\n", - "\ton_load()\n", - " })\n", - " root._bokeh_is_loading = css_urls.length + 9;\n", - " } else {\n", - " root._bokeh_is_loading = css_urls.length + js_urls.length + js_modules.length + Object.keys(js_exports).length;\n", - " }\n", - "\n", - " var existing_stylesheets = []\n", - " var links = document.getElementsByTagName('link')\n", - " for (var i = 0; i < links.length; i++) {\n", - " var link = links[i]\n", - " if (link.href != null) {\n", - "\texisting_stylesheets.push(link.href)\n", - " }\n", - " }\n", - " for (var i = 0; i < css_urls.length; i++) {\n", - " var url = css_urls[i];\n", - " if (existing_stylesheets.indexOf(url) !== -1) {\n", - "\ton_load()\n", - "\tcontinue;\n", - " }\n", - " const element = document.createElement(\"link\");\n", - " element.onload = on_load;\n", - " element.onerror = on_error;\n", - " element.rel = \"stylesheet\";\n", - " element.type = \"text/css\";\n", - " element.href = url;\n", - " console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n", - " document.body.appendChild(element);\n", - " } if (((window['jsPanel'] !== undefined) && (!(window['jsPanel'] instanceof HTMLElement))) || 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existing_scripts.indexOf(url) !== -1) {\n", - "\tif (!window.requirejs) {\n", - "\t on_load();\n", - "\t}\n", - "\tcontinue;\n", - " }\n", - " var element = document.createElement('script');\n", - " element.onload = on_load;\n", - " element.onerror = on_error;\n", - " element.async = false;\n", - " element.src = url;\n", - " console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n", - " document.head.appendChild(element);\n", - " }\n", - " for (var i = 0; i < js_modules.length; i++) {\n", - " var url = js_modules[i];\n", - " if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n", - "\tif (!window.requirejs) {\n", - "\t on_load();\n", - "\t}\n", - "\tcontinue;\n", - " }\n", - " var element = document.createElement('script');\n", - " element.onload = on_load;\n", - " element.onerror = on_error;\n", - " element.async = false;\n", - " element.src = url;\n", - " element.type = \"module\";\n", - " console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n", - " document.head.appendChild(element);\n", - " }\n", - " for (const name in js_exports) {\n", - " var url = js_exports[name];\n", - " if (skip.indexOf(url) >= 0 || root[name] != null) {\n", - "\tif (!window.requirejs) {\n", - "\t on_load();\n", - "\t}\n", - "\tcontinue;\n", - " }\n", - " var element = document.createElement('script');\n", - " element.onerror = on_error;\n", - " element.async = false;\n", - " element.type = \"module\";\n", - " console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n", - " element.textContent = `\n", - " import ${name} from \"${url}\"\n", - " window.${name} = ${name}\n", - " window._bokeh_on_load()\n", - " `\n", - " document.head.appendChild(element);\n", - " }\n", - " if (!js_urls.length && !js_modules.length) {\n", - " on_load()\n", - " }\n", - " };\n", - "\n", - " function inject_raw_css(css) {\n", - " const element = document.createElement(\"style\");\n", - " element.appendChild(document.createTextNode(css));\n", - " document.body.appendChild(element);\n", - " }\n", - "\n", - " var js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.1.1.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.1.1.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.1.1.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.1.1.min.js\", \"https://cdn.holoviz.org/panel/1.1.0/dist/panel.min.js\"];\n", - " var js_modules = [];\n", - " var js_exports = {};\n", - " var css_urls = [];\n", - " var inline_js = [ function(Bokeh) {\n", - " Bokeh.set_log_level(\"info\");\n", - " },\n", - "function(Bokeh) {} // ensure no trailing comma for IE\n", - " ];\n", - "\n", - " function run_inline_js() {\n", - " if ((root.Bokeh !== undefined) || (force === true)) {\n", - " for (var i = 0; i < inline_js.length; i++) {\n", - " inline_js[i].call(root, root.Bokeh);\n", - " }\n", - " // Cache old bokeh versions\n", - " if (Bokeh != undefined && !reloading) {\n", - "\tvar NewBokeh = root.Bokeh;\n", - "\tif (Bokeh.versions === undefined) {\n", - "\t Bokeh.versions = new Map();\n", - "\t}\n", - "\tif (NewBokeh.version !== Bokeh.version) {\n", - "\t Bokeh.versions.set(NewBokeh.version, NewBokeh)\n", - "\t}\n", - "\troot.Bokeh = Bokeh;\n", - " }} else if (Date.now() < root._bokeh_timeout) {\n", - " setTimeout(run_inline_js, 100);\n", - " } else if (!root._bokeh_failed_load) {\n", - " console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n", - " root._bokeh_failed_load = true;\n", - " }\n", - " root._bokeh_is_initializing = false\n", - " }\n", - "\n", - " function load_or_wait() {\n", - " // Implement a backoff loop that tries to ensure we do not load multiple\n", - " // versions of Bokeh and its dependencies at the same time.\n", - " // In recent versions we use the root._bokeh_is_initializing flag\n", - " // to determine whether there is an ongoing attempt to initialize\n", - " // bokeh, however for backward compatibility we also try to ensure\n", - " // that we do not start loading a newer (Panel>=1.0 and Bokeh>3) version\n", - " // before older versions are fully initialized.\n", - " if (root._bokeh_is_initializing && Date.now() > root._bokeh_timeout) {\n", - " root._bokeh_is_initializing = false;\n", - " root._bokeh_onload_callbacks = undefined;\n", - " console.log(\"Bokeh: BokehJS was loaded multiple times but one version failed to initialize.\");\n", - " load_or_wait();\n", - " } else if (root._bokeh_is_initializing || (typeof root._bokeh_is_initializing === \"undefined\" && root._bokeh_onload_callbacks !== undefined)) {\n", - " setTimeout(load_or_wait, 100);\n", - " } else {\n", - " Bokeh = root.Bokeh;\n", - " bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n", - " root._bokeh_is_initializing = true\n", - " root._bokeh_onload_callbacks = []\n", - " if (!reloading && (!bokeh_loaded || is_dev)) {\n", - "\troot.Bokeh = undefined;\n", - " }\n", - " load_libs(css_urls, js_urls, js_modules, js_exports, function() {\n", - "\tconsole.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n", - "\trun_inline_js();\n", - " });\n", - " }\n", - " }\n", - " // Give older versions of the autoload script a head-start to ensure\n", - " // they initialize before we start loading newer version.\n", - " setTimeout(load_or_wait, 100)\n", - "}(window));" - ], - "application/vnd.holoviews_load.v0+json": "(function(root) {\n function now() {\n return new Date();\n }\n\n var force = true;\n var py_version = '3.1.1'.replace('rc', '-rc.');\n var is_dev = py_version.indexOf(\"+\") !== -1 || py_version.indexOf(\"-\") !== -1;\n var reloading = false;\n var Bokeh = root.Bokeh;\n var bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n\n if (typeof (root._bokeh_timeout) === \"undefined\" || force) {\n root._bokeh_timeout = Date.now() + 5000;\n root._bokeh_failed_load = false;\n }\n\n function run_callbacks() {\n try {\n root._bokeh_onload_callbacks.forEach(function(callback) {\n if (callback != null)\n callback();\n });\n } finally {\n delete root._bokeh_onload_callbacks;\n }\n console.debug(\"Bokeh: all callbacks have finished\");\n }\n\n function load_libs(css_urls, js_urls, js_modules, js_exports, callback) {\n if (css_urls == null) css_urls = [];\n if (js_urls == null) js_urls = [];\n if (js_modules == null) js_modules = [];\n if (js_exports == null) js_exports = {};\n\n root._bokeh_onload_callbacks.push(callback);\n\n if (root._bokeh_is_loading > 0) {\n console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n return null;\n }\n if (js_urls.length === 0 && js_modules.length === 0 && Object.keys(js_exports).length === 0) {\n run_callbacks();\n return null;\n }\n if (!reloading) {\n console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n }\n\n function on_load() {\n root._bokeh_is_loading--;\n if (root._bokeh_is_loading === 0) {\n console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n run_callbacks()\n }\n }\n window._bokeh_on_load = on_load\n\n function on_error() {\n console.error(\"failed to load \" + url);\n }\n\n var skip = [];\n if (window.requirejs) {\n window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 'https://cdn.jsdelivr.net/npm/gridstack@7.2.3/dist/gridstack-all', 'notyf': 'https://cdn.jsdelivr.net/npm/notyf@3/notyf.min'}, 'shim': {'jspanel': {'exports': 'jsPanel'}, 'gridstack': {'exports': 'GridStack'}}});\n require([\"jspanel\"], function(jsPanel) {\n\twindow.jsPanel = jsPanel\n\ton_load()\n })\n require([\"jspanel-modal\"], function() {\n\ton_load()\n })\n require([\"jspanel-tooltip\"], function() {\n\ton_load()\n })\n require([\"jspanel-hint\"], function() {\n\ton_load()\n })\n require([\"jspanel-layout\"], function() {\n\ton_load()\n })\n require([\"jspanel-contextmenu\"], function() {\n\ton_load()\n })\n require([\"jspanel-dock\"], function() {\n\ton_load()\n })\n require([\"gridstack\"], function(GridStack) {\n\twindow.GridStack = GridStack\n\ton_load()\n })\n require([\"notyf\"], function() {\n\ton_load()\n })\n root._bokeh_is_loading = css_urls.length + 9;\n } else {\n root._bokeh_is_loading = css_urls.length + js_urls.length + js_modules.length + Object.keys(js_exports).length;\n }\n\n var existing_stylesheets = []\n var links = document.getElementsByTagName('link')\n for (var i = 0; i < links.length; i++) {\n var link = links[i]\n if (link.href != null) {\n\texisting_stylesheets.push(link.href)\n }\n }\n for (var i = 0; i < css_urls.length; i++) {\n var url = css_urls[i];\n if (existing_stylesheets.indexOf(url) !== -1) {\n\ton_load()\n\tcontinue;\n }\n const element = document.createElement(\"link\");\n element.onload = on_load;\n element.onerror = on_error;\n element.rel = \"stylesheet\";\n element.type = \"text/css\";\n element.href = url;\n console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n document.body.appendChild(element);\n } if (((window['jsPanel'] !== undefined) && (!(window['jsPanel'] instanceof HTMLElement))) || window.requirejs) {\n var urls = ['https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/jspanel.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock.js'];\n for (var i = 0; i < urls.length; i++) {\n skip.push(urls[i])\n }\n } if (((window['GridStack'] !== undefined) && (!(window['GridStack'] instanceof HTMLElement))) || 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- ], - "application/vnd.holoviews_load.v0+json": "\nif ((window.PyViz === undefined) || (window.PyViz instanceof HTMLElement)) {\n window.PyViz = {comms: {}, comm_status:{}, kernels:{}, receivers: {}, plot_index: []}\n}\n\n\n function JupyterCommManager() {\n }\n\n JupyterCommManager.prototype.register_target = function(plot_id, comm_id, msg_handler) {\n if (window.comm_manager || ((window.Jupyter !== undefined) && (Jupyter.notebook.kernel != null))) {\n var comm_manager = window.comm_manager || Jupyter.notebook.kernel.comm_manager;\n comm_manager.register_target(comm_id, function(comm) {\n comm.on_msg(msg_handler);\n });\n } else if ((plot_id in window.PyViz.kernels) && (window.PyViz.kernels[plot_id])) {\n window.PyViz.kernels[plot_id].registerCommTarget(comm_id, function(comm) {\n comm.onMsg = msg_handler;\n });\n } else if (typeof google != 'undefined' && google.colab.kernel != null) {\n google.colab.kernel.comms.registerTarget(comm_id, (comm) => {\n var messages = 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window.PyViz.plot_index[id] = Bokeh.index[id];\n } else {\n window.PyViz.plot_index[id] = null;\n }\n } else if (output.metadata[EXEC_MIME_TYPE][\"server_id\"] !== undefined) {\n var bk_div = document.createElement(\"div\");\n bk_div.innerHTML = output.data[HTML_MIME_TYPE];\n var script_attrs = bk_div.children[0].attributes;\n for (var i = 0; i < script_attrs.length; i++) {\n toinsert[toinsert.length - 1].childNodes[1].setAttribute(script_attrs[i].name, script_attrs[i].value);\n }\n // store reference to server id on output_area\n output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n }\n}\n\n/**\n * Handle when an output is cleared or removed\n */\nfunction handle_clear_output(event, handle) {\n var id = handle.cell.output_area._hv_plot_id;\n var server_id = handle.cell.output_area._bokeh_server_id;\n if (((id === undefined) || !(id in PyViz.plot_index)) && (server_id !== undefined)) { return; }\n var comm = window.PyViz.comm_manager.get_client_comm(\"hv-extension-comm\", \"hv-extension-comm\", function () {});\n if (server_id !== null) {\n comm.send({event_type: 'server_delete', 'id': server_id});\n return;\n } else if (comm !== null) {\n comm.send({event_type: 'delete', 'id': id});\n }\n delete PyViz.plot_index[id];\n if ((window.Bokeh !== undefined) & (id in window.Bokeh.index)) {\n var doc = window.Bokeh.index[id].model.document\n doc.clear();\n const i = window.Bokeh.documents.indexOf(doc);\n if (i > -1) {\n window.Bokeh.documents.splice(i, 1);\n }\n }\n}\n\n/**\n * Handle kernel restart event\n */\nfunction handle_kernel_cleanup(event, handle) {\n delete PyViz.comms[\"hv-extension-comm\"];\n window.PyViz.plot_index = {}\n}\n\n/**\n * Handle update_display_data messages\n */\nfunction handle_update_output(event, handle) {\n handle_clear_output(event, {cell: {output_area: handle.output_area}})\n handle_add_output(event, handle)\n}\n\nfunction register_renderer(events, OutputArea) {\n function append_mime(data, metadata, element) {\n // create a DOM node to render to\n var toinsert = this.create_output_subarea(\n metadata,\n CLASS_NAME,\n EXEC_MIME_TYPE\n );\n this.keyboard_manager.register_events(toinsert);\n // Render to node\n var props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n render(props, toinsert[0]);\n element.append(toinsert);\n return toinsert\n }\n\n events.on('output_added.OutputArea', handle_add_output);\n events.on('output_updated.OutputArea', handle_update_output);\n events.on('clear_output.CodeCell', handle_clear_output);\n events.on('delete.Cell', handle_clear_output);\n events.on('kernel_ready.Kernel', handle_kernel_cleanup);\n\n OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n safe: true,\n index: 0\n });\n}\n\nif (window.Jupyter !== undefined) {\n try {\n var events = require('base/js/events');\n var OutputArea = require('notebook/js/outputarea').OutputArea;\n if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n register_renderer(events, OutputArea);\n }\n } catch(err) {\n }\n}\n" - }, - "metadata": {}, - "output_type": "display_data" - }, - { - "data": { - "text/html": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" - }, - { - "data": { - "application/javascript": [ - "(function(root) {\n", - " function now() {\n", - " return new Date();\n", - " }\n", - "\n", - " var force = true;\n", - " var py_version = '3.1.1'.replace('rc', '-rc.');\n", - " var is_dev = py_version.indexOf(\"+\") !== -1 || py_version.indexOf(\"-\") !== -1;\n", - " var reloading = true;\n", - " var Bokeh = root.Bokeh;\n", - " var bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n", - "\n", - " if (typeof (root._bokeh_timeout) === \"undefined\" || force) {\n", - " root._bokeh_timeout = Date.now() + 5000;\n", - " root._bokeh_failed_load = false;\n", - " }\n", - "\n", - " function run_callbacks() {\n", - " try {\n", - " root._bokeh_onload_callbacks.forEach(function(callback) {\n", - " if (callback != null)\n", - " callback();\n", - " });\n", - " } finally {\n", - " delete root._bokeh_onload_callbacks;\n", - " }\n", - " console.debug(\"Bokeh: all callbacks have finished\");\n", - " }\n", - "\n", - " function load_libs(css_urls, js_urls, js_modules, js_exports, callback) {\n", - " if (css_urls == null) css_urls = [];\n", - " if (js_urls == null) js_urls = [];\n", - " if (js_modules == null) js_modules = [];\n", - " if (js_exports == null) js_exports = {};\n", - "\n", - " root._bokeh_onload_callbacks.push(callback);\n", - "\n", - " if (root._bokeh_is_loading > 0) {\n", - " console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n", - " return null;\n", - " }\n", - " if (js_urls.length === 0 && js_modules.length === 0 && Object.keys(js_exports).length === 0) {\n", - " run_callbacks();\n", - " return null;\n", - " }\n", - " if (!reloading) {\n", - " console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n", - " }\n", - "\n", - " function on_load() {\n", - " root._bokeh_is_loading--;\n", - " if (root._bokeh_is_loading === 0) {\n", - " console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n", - " run_callbacks()\n", - " }\n", - " }\n", - " window._bokeh_on_load = on_load\n", - "\n", - " function on_error() {\n", - " console.error(\"failed to load \" + url);\n", - " }\n", - "\n", - " var skip = [];\n", - " if (window.requirejs) {\n", - " window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 'https://cdn.jsdelivr.net/npm/gridstack@7.2.3/dist/gridstack-all', 'notyf': 'https://cdn.jsdelivr.net/npm/notyf@3/notyf.min'}, 'shim': {'jspanel': {'exports': 'jsPanel'}, 'gridstack': {'exports': 'GridStack'}}});\n", - " require([\"jspanel\"], function(jsPanel) {\n", - "\twindow.jsPanel = jsPanel\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-modal\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-tooltip\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-hint\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-layout\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-contextmenu\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"jspanel-dock\"], function() {\n", - "\ton_load()\n", - " })\n", - " require([\"gridstack\"], function(GridStack) {\n", - "\twindow.GridStack = GridStack\n", - "\ton_load()\n", - " })\n", - " require([\"notyf\"], function() {\n", - "\ton_load()\n", - " })\n", - " root._bokeh_is_loading = css_urls.length + 9;\n", - " } else {\n", - " root._bokeh_is_loading = css_urls.length + js_urls.length + js_modules.length + Object.keys(js_exports).length;\n", - " }\n", - "\n", - " var existing_stylesheets = []\n", - " var links = document.getElementsByTagName('link')\n", - " for (var i = 0; i < links.length; i++) {\n", - " var link = links[i]\n", - " if (link.href != null) {\n", - "\texisting_stylesheets.push(link.href)\n", - " }\n", - " }\n", - " for (var i = 0; i < css_urls.length; i++) {\n", - " var url = css_urls[i];\n", - " if (existing_stylesheets.indexOf(url) !== -1) {\n", - "\ton_load()\n", - "\tcontinue;\n", - " }\n", - " const element = document.createElement(\"link\");\n", - " element.onload = on_load;\n", - " element.onerror = on_error;\n", - " element.rel = \"stylesheet\";\n", - " element.type = \"text/css\";\n", - " element.href = url;\n", - " console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n", - " document.body.appendChild(element);\n", - " } if (((window['jsPanel'] !== undefined) && (!(window['jsPanel'] instanceof HTMLElement))) || window.requirejs) {\n", - " var urls = ['https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/jspanel.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu.js', 'https://cdn.holoviz.org/panel/1.1.0/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock.js'];\n", - " for (var i = 0; i < urls.length; i++) {\n", - " skip.push(urls[i])\n", - " }\n", - " } if (((window['GridStack'] !== undefined) && (!(window['GridStack'] instanceof HTMLElement))) || window.requirejs) {\n", - " var urls = ['https://cdn.holoviz.org/panel/1.1.0/dist/bundled/gridstack/gridstack@7.2.3/dist/gridstack-all.js'];\n", - " for (var i = 0; i < urls.length; i++) {\n", - " skip.push(urls[i])\n", - " }\n", - " } if (((window['Notyf'] !== undefined) && (!(window['Notyf'] instanceof HTMLElement))) || window.requirejs) {\n", - " var urls = ['https://cdn.holoviz.org/panel/1.1.0/dist/bundled/notificationarea/notyf@3/notyf.min.js'];\n", - " for (var i = 0; i < urls.length; i++) {\n", - " skip.push(urls[i])\n", - " }\n", - " } var existing_scripts = []\n", - " var scripts = document.getElementsByTagName('script')\n", - " for (var i = 0; i < scripts.length; i++) {\n", - " var script = scripts[i]\n", - " if (script.src != null) {\n", - "\texisting_scripts.push(script.src)\n", - " }\n", - " }\n", - " for (var i = 0; i < js_urls.length; i++) {\n", - " var url = js_urls[i];\n", - " if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n", - "\tif (!window.requirejs) {\n", - "\t on_load();\n", - "\t}\n", - "\tcontinue;\n", - " }\n", - " var element = document.createElement('script');\n", - " element.onload = on_load;\n", - " element.onerror = on_error;\n", - " element.async = false;\n", - " element.src = url;\n", - " console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n", - " document.head.appendChild(element);\n", - " }\n", - " for (var i = 0; i < js_modules.length; i++) {\n", - " var url = js_modules[i];\n", - " if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n", - "\tif (!window.requirejs) {\n", - "\t on_load();\n", - "\t}\n", - "\tcontinue;\n", - " }\n", - " var element = document.createElement('script');\n", - " element.onload = on_load;\n", - " element.onerror = on_error;\n", - " element.async = false;\n", - " element.src = url;\n", - " element.type = \"module\";\n", - " console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n", - " document.head.appendChild(element);\n", - " }\n", - " for (const name in js_exports) {\n", - " var url = js_exports[name];\n", - " if (skip.indexOf(url) >= 0 || root[name] != null) {\n", - "\tif (!window.requirejs) {\n", - "\t on_load();\n", - "\t}\n", - "\tcontinue;\n", - " }\n", - " var element = document.createElement('script');\n", - " element.onerror = on_error;\n", - " element.async = false;\n", - " element.type = \"module\";\n", - " console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n", - " element.textContent = `\n", - " import ${name} from \"${url}\"\n", - " window.${name} = ${name}\n", - " window._bokeh_on_load()\n", - " `\n", - " document.head.appendChild(element);\n", - " }\n", - " if (!js_urls.length && !js_modules.length) {\n", - " on_load()\n", - " }\n", - " };\n", - "\n", - " function inject_raw_css(css) {\n", - " const element = document.createElement(\"style\");\n", - " element.appendChild(document.createTextNode(css));\n", - " document.body.appendChild(element);\n", - " }\n", - "\n", - " var js_urls = [];\n", - " var js_modules = [];\n", - " var js_exports = {};\n", - " var css_urls = [];\n", - " var inline_js = [ function(Bokeh) {\n", - " Bokeh.set_log_level(\"info\");\n", - " },\n", - "function(Bokeh) {} // ensure no trailing comma for IE\n", - " ];\n", - "\n", - " function run_inline_js() {\n", - " if ((root.Bokeh !== undefined) || (force === true)) {\n", - " for (var i = 0; i < inline_js.length; i++) {\n", - " inline_js[i].call(root, root.Bokeh);\n", - " }\n", - " // Cache old bokeh versions\n", - " if (Bokeh != undefined && !reloading) {\n", - "\tvar NewBokeh = root.Bokeh;\n", - "\tif (Bokeh.versions === undefined) {\n", - "\t Bokeh.versions = new Map();\n", - "\t}\n", - "\tif (NewBokeh.version !== Bokeh.version) {\n", - "\t Bokeh.versions.set(NewBokeh.version, NewBokeh)\n", - "\t}\n", - "\troot.Bokeh = Bokeh;\n", - " }} else if (Date.now() < root._bokeh_timeout) {\n", - " setTimeout(run_inline_js, 100);\n", - " } else if (!root._bokeh_failed_load) {\n", - " console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n", - " root._bokeh_failed_load = true;\n", - " }\n", - " root._bokeh_is_initializing = false\n", - " }\n", - "\n", - " function load_or_wait() {\n", - " // Implement a backoff loop that tries to ensure we do not load multiple\n", - " // versions of Bokeh and its dependencies at the same time.\n", - " // In recent versions we use the root._bokeh_is_initializing flag\n", - " // to determine whether there is an ongoing attempt to initialize\n", - " // bokeh, however for backward compatibility we also try to ensure\n", - " // that we do not start loading a newer (Panel>=1.0 and Bokeh>3) version\n", - " // before older versions are fully initialized.\n", - " if (root._bokeh_is_initializing && Date.now() > root._bokeh_timeout) {\n", - " root._bokeh_is_initializing = false;\n", - " root._bokeh_onload_callbacks = undefined;\n", - " console.log(\"Bokeh: BokehJS was loaded multiple times but one version failed to initialize.\");\n", - " load_or_wait();\n", - " } else if (root._bokeh_is_initializing || (typeof root._bokeh_is_initializing === \"undefined\" && root._bokeh_onload_callbacks !== undefined)) {\n", - " setTimeout(load_or_wait, 100);\n", - " } else {\n", - " Bokeh = root.Bokeh;\n", - " bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n", - " root._bokeh_is_initializing = true\n", - " root._bokeh_onload_callbacks = []\n", - " if (!reloading && (!bokeh_loaded || is_dev)) {\n", - "\troot.Bokeh = undefined;\n", - " }\n", - " load_libs(css_urls, js_urls, js_modules, js_exports, function() {\n", - "\tconsole.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n", - "\trun_inline_js();\n", - " });\n", - " }\n", - " }\n", - " // Give older versions of the autoload script a head-start to ensure\n", - " // they initialize before we start loading newer version.\n", - " setTimeout(load_or_wait, 100)\n", - "}(window));" - ], - "application/vnd.holoviews_load.v0+json": "(function(root) {\n function now() {\n return new Date();\n }\n\n var force = true;\n var py_version = '3.1.1'.replace('rc', '-rc.');\n var is_dev = py_version.indexOf(\"+\") !== -1 || py_version.indexOf(\"-\") !== -1;\n var reloading = true;\n var Bokeh = root.Bokeh;\n var bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n\n if (typeof (root._bokeh_timeout) === \"undefined\" || force) {\n root._bokeh_timeout = Date.now() + 5000;\n root._bokeh_failed_load = false;\n }\n\n function run_callbacks() {\n try {\n root._bokeh_onload_callbacks.forEach(function(callback) {\n if (callback != null)\n callback();\n });\n } finally {\n delete root._bokeh_onload_callbacks;\n }\n console.debug(\"Bokeh: all callbacks have finished\");\n }\n\n function load_libs(css_urls, js_urls, js_modules, js_exports, callback) {\n if (css_urls == null) css_urls = [];\n if (js_urls == null) js_urls = [];\n if (js_modules == null) js_modules = [];\n if (js_exports == null) js_exports = {};\n\n root._bokeh_onload_callbacks.push(callback);\n\n if (root._bokeh_is_loading > 0) {\n console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n return null;\n }\n if (js_urls.length === 0 && js_modules.length === 0 && Object.keys(js_exports).length === 0) {\n run_callbacks();\n return null;\n }\n if (!reloading) {\n console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n }\n\n function on_load() {\n root._bokeh_is_loading--;\n if (root._bokeh_is_loading === 0) {\n console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n run_callbacks()\n }\n }\n window._bokeh_on_load = on_load\n\n function on_error() {\n console.error(\"failed to load \" + url);\n }\n\n var skip = [];\n if (window.requirejs) {\n window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 'https://cdn.jsdelivr.net/npm/gridstack@7.2.3/dist/gridstack-all', 'notyf': 'https://cdn.jsdelivr.net/npm/notyf@3/notyf.min'}, 'shim': {'jspanel': {'exports': 'jsPanel'}, 'gridstack': {'exports': 'GridStack'}}});\n require([\"jspanel\"], function(jsPanel) {\n\twindow.jsPanel = jsPanel\n\ton_load()\n })\n require([\"jspanel-modal\"], function() {\n\ton_load()\n })\n require([\"jspanel-tooltip\"], function() {\n\ton_load()\n })\n require([\"jspanel-hint\"], function() {\n\ton_load()\n })\n require([\"jspanel-layout\"], function() {\n\ton_load()\n })\n require([\"jspanel-contextmenu\"], function() {\n\ton_load()\n })\n require([\"jspanel-dock\"], function() {\n\ton_load()\n })\n require([\"gridstack\"], function(GridStack) {\n\twindow.GridStack = GridStack\n\ton_load()\n })\n require([\"notyf\"], function() {\n\ton_load()\n })\n root._bokeh_is_loading = css_urls.length + 9;\n } else {\n root._bokeh_is_loading = css_urls.length + js_urls.length + js_modules.length + Object.keys(js_exports).length;\n }\n\n var existing_stylesheets = []\n var links = document.getElementsByTagName('link')\n for (var i = 0; i < links.length; i++) {\n var link = links[i]\n if (link.href != null) {\n\texisting_stylesheets.push(link.href)\n }\n }\n for (var i = 0; i < css_urls.length; i++) {\n var url = css_urls[i];\n if (existing_stylesheets.indexOf(url) !== -1) {\n\ton_load()\n\tcontinue;\n }\n const element = document.createElement(\"link\");\n element.onload = on_load;\n element.onerror = on_error;\n element.rel = \"stylesheet\";\n element.type = \"text/css\";\n element.href = url;\n console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", 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metadata,\n CLASS_NAME,\n EXEC_MIME_TYPE\n );\n this.keyboard_manager.register_events(toinsert);\n // Render to node\n var props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n render(props, toinsert[0]);\n element.append(toinsert);\n return toinsert\n }\n\n events.on('output_added.OutputArea', handle_add_output);\n events.on('output_updated.OutputArea', handle_update_output);\n events.on('clear_output.CodeCell', handle_clear_output);\n events.on('delete.Cell', handle_clear_output);\n events.on('kernel_ready.Kernel', handle_kernel_cleanup);\n\n OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n safe: true,\n index: 0\n });\n}\n\nif (window.Jupyter !== undefined) {\n try {\n var events = require('base/js/events');\n var OutputArea = require('notebook/js/outputarea').OutputArea;\n if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n register_renderer(events, OutputArea);\n }\n } catch(err) {\n }\n}\n" - }, - "metadata": {}, - "output_type": "display_data" - }, - { - "data": { - "text/html": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" - } - ], + "outputs": [], "source": [ "import hvplot.xarray\n", "import holoviews as hv\n", @@ -1206,32 +93,12 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": null, "id": "b82ae2da-1928-4f6b-b17b-551b82465845", "metadata": { "tags": [] }, - "outputs": [ - { - "data": { - "text/plain": [ - "mip_era [CMIP6]\n", - "activity_id [CMIP]\n", - "institution_id [NCAR]\n", - "source_id [CESM2]\n", - "experiment_id [historical]\n", - "member_id [r11i1p1f1]\n", - "table_id [Omon]\n", - "variable_id [tos]\n", - "grid_label [gr, gn]\n", - "dtype: object" - ] - }, - "execution_count": 2, - "metadata": {}, - "output_type": "execute_result" - } - ], + "outputs": [], "source": [ "cat = ESGFCatalog()\n", "cat.search(\n", @@ -1250,2113 +117,17 @@ "metadata": {}, "source": [ "### Load into a DataTree\n", - "Once we subset for our data, we can load the data into a datatree, which is a nested structure of `xarray.Dataset`s." + "Once we subset for our data, we can load the data into a datatree, which is a nested structure of `xarray.Dataset`s, which include the climate grid cell statistics as well!" ] }, { "cell_type": "code", - "execution_count": 3, + "execution_count": null, "id": "2b8d3bc8-f568-44f7-bee2-833cf532d823", "metadata": { "tags": [] }, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "Loading datasets: 100%|############################################################################################################| 2/2 [00:09<00:00, 4.74s/dataset]\n" - ] - }, - { - "data": { - "text/html": [ - "
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<xarray.DatasetView>\n",
-       "Dimensions:  ()\n",
-       "Data variables:\n",
-       "    *empty*
" - ], - "text/plain": [ - "DataTree('None', parent=None)\n", - "├── DataTree('gr')\n", - "│ Dimensions: (time: 1980, d2: 2, lat: 180, lon: 360)\n", - "│ Coordinates:\n", - "│ * time (time) object 1850-01-15 13:00:00.000008 ... 2014-12-15 12:00:00\n", - "│ * lat (lat) float64 -89.5 -88.5 -87.5 -86.5 ... 86.5 87.5 88.5 89.5\n", - "│ * lon (lon) float64 0.5 1.5 2.5 3.5 4.5 ... 356.5 357.5 358.5 359.5\n", - "│ Dimensions without coordinates: d2\n", - "│ Data variables:\n", - "│ time_bnds (time, d2) object dask.array\n", - "│ lat_bnds (time, lat, d2) float64 dask.array\n", - "│ lon_bnds (time, lon, d2) float64 dask.array\n", - "│ tos (time, lat, lon) float32 dask.array\n", - "│ Attributes: (12/45)\n", - "│ Conventions: CF-1.7 CMIP-6.2\n", - "│ activity_id: CMIP\n", - "│ branch_method: standard\n", - "│ branch_time_in_child: 674885.0\n", - "│ branch_time_in_parent: 219000.0\n", - "│ case_id: 972\n", - "│ ... ...\n", - "│ sub_experiment_id: none\n", - "│ table_id: Omon\n", - "│ tracking_id: hdl:21.14100/0b412958-1dae-4684-9a1e-0c2ab29c492e\n", - "│ variable_id: tos\n", - "│ variant_info: CMIP6 20th century experiments (1850-2014) with C...\n", - "│ variant_label: r11i1p1f1\n", - "└── DataTree('gn')\n", - " Dimensions: (time: 1980, nlat: 384, nlon: 320, d2: 2, vertices: 4)\n", - " Coordinates:\n", - " lat (nlat, nlon) float64 dask.array\n", - " lon (nlat, nlon) float64 dask.array\n", - " * nlat (nlat) int32 1 2 3 4 5 6 7 8 ... 377 378 379 380 381 382 383 384\n", - " * nlon (nlon) int32 1 2 3 4 5 6 7 8 ... 313 314 315 316 317 318 319 320\n", - " * time (time) object 1850-01-15 13:00:00.000008 ... 2014-12-15 12:00:00\n", - " Dimensions without coordinates: d2, vertices\n", - " Data variables:\n", - " tos (time, nlat, nlon) float32 dask.array\n", - " time_bnds (time, d2) object dask.array\n", - " lat_bnds (time, nlat, nlon, vertices) float32 dask.array\n", - " lon_bnds (time, nlat, nlon, vertices) float32 dask.array\n", - " Attributes: (12/45)\n", - " Conventions: CF-1.7 CMIP-6.2\n", - " activity_id: CMIP\n", - " branch_method: standard\n", - " branch_time_in_child: 674885.0\n", - " branch_time_in_parent: 219000.0\n", - " case_id: 972\n", - " ... ...\n", - " sub_experiment_id: none\n", - " table_id: Omon\n", - " tracking_id: hdl:21.14100/b0ffb89d-095d-4533-a159-a2e1241ff138\n", - " variable_id: tos\n", - " variant_info: CMIP6 20th century experiments (1850-2014) with C...\n", - " variant_label: r11i1p1f1" - ] - }, - "execution_count": 3, - "metadata": {}, - "output_type": "execute_result" - } - ], + "outputs": [], "source": [ "tos_tree = cat.to_datatree()\n", "tos_tree" @@ -3364,811 +135,24 @@ }, { "cell_type": "markdown", - "id": "2cf8ff53-028b-4998-b6f2-467bfc1e6599", - "metadata": {}, - "source": [ - "### Follow the Same Process for our Cell Area Dataset\n", - "We follow the same process for our grid cell area dataset, using the following query." - ] - }, - { - "cell_type": "code", - "execution_count": 4, - "id": "ad09b4da-0aac-4a0e-972f-3896fb3293b4", + "id": "5395c611-afda-405e-9b1c-35b7566c557f", "metadata": { "tags": [] }, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "Loading datasets: 100%|############################################################################################################| 2/2 [00:02<00:00, 1.06s/dataset]\n" - ] - } - ], "source": [ - "cat = ESGFCatalog()\n", - "cat.search(\n", - " activity_id='CMIP',\n", - " experiment_id=[\"historical\",\"ssp585\"],\n", - " source_id=\"CESM2\",\n", - " variable_id=[\"areacello\"],\n", - " member_id='r11i1p1f1',\n", - " )\n", - "area_tree = cat.to_datatree()" - ] - }, - { - "cell_type": "markdown", - "id": "fcd5409e-9a4e-4065-b3a5-2e1ab25e3d5a", - "metadata": {}, - "source": [ - "### Merge the Datasets Together\n", - "We would like to merge the datasets together, which makes them easier to work with!\n", - "\n", - "We would like to stay on the native model grid, using the `gn` node of the datatree, which represents the model native grid data." + "The nodes in the tree represent two different, grids. We would like to stay on the native model grid, using the `gn` node of the datatree, which represents the model native grid data." ] }, { "cell_type": "code", - "execution_count": 5, + "execution_count": null, "id": "317a9198-19ba-4e73-b006-4a8ba61327a8", "metadata": { "tags": [] }, - "outputs": [ - { - "data": { - "text/html": [ - "
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-       "Dimensions:    (time: 1980, nlat: 384, nlon: 320, d2: 2, vertices: 4)\n",
-       "Coordinates:\n",
-       "    lat        (nlat, nlon) float64 -79.22 -79.22 -79.22 ... 72.2 72.19 72.19\n",
-       "    lon        (nlat, nlon) float64 320.6 321.7 322.8 ... 318.9 319.4 319.8\n",
-       "  * nlat       (nlat) int32 1 2 3 4 5 6 7 8 ... 377 378 379 380 381 382 383 384\n",
-       "  * nlon       (nlon) int32 1 2 3 4 5 6 7 8 ... 313 314 315 316 317 318 319 320\n",
-       "  * time       (time) object 1850-01-15 13:00:00.000008 ... 2014-12-15 12:00:00\n",
-       "Dimensions without coordinates: d2, vertices\n",
-       "Data variables:\n",
-       "    tos        (time, nlat, nlon) float32 dask.array<chunksize=(1, 384, 320), meta=np.ndarray>\n",
-       "    time_bnds  (time, d2) object dask.array<chunksize=(1, 2), meta=np.ndarray>\n",
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-       "    lon_bnds   (time, nlat, nlon, vertices) float32 320.0 321.1 ... 320.0 319.6\n",
-       "    areacello  (nlat, nlon) float32 ...\n",
-       "Attributes: (12/45)\n",
-       "    Conventions:            CF-1.7 CMIP-6.2\n",
-       "    activity_id:            CMIP\n",
-       "    branch_method:          standard\n",
-       "    branch_time_in_child:   674885.0\n",
-       "    branch_time_in_parent:  219000.0\n",
-       "    case_id:                972\n",
-       "    ...                     ...\n",
-       "    sub_experiment_id:      none\n",
-       "    table_id:               Omon\n",
-       "    tracking_id:            hdl:21.14100/b0ffb89d-095d-4533-a159-a2e1241ff138\n",
-       "    variable_id:            tos\n",
-       "    variant_info:           CMIP6 20th century experiments (1850-2014) with C...\n",
-       "    variant_label:          r11i1p1f1
" - ], - "text/plain": [ - "\n", - "Dimensions: (time: 1980, nlat: 384, nlon: 320, d2: 2, vertices: 4)\n", - "Coordinates:\n", - " lat (nlat, nlon) float64 -79.22 -79.22 -79.22 ... 72.2 72.19 72.19\n", - " lon (nlat, nlon) float64 320.6 321.7 322.8 ... 318.9 319.4 319.8\n", - " * nlat (nlat) int32 1 2 3 4 5 6 7 8 ... 377 378 379 380 381 382 383 384\n", - " * nlon (nlon) int32 1 2 3 4 5 6 7 8 ... 313 314 315 316 317 318 319 320\n", - " * time (time) object 1850-01-15 13:00:00.000008 ... 2014-12-15 12:00:00\n", - "Dimensions without coordinates: d2, vertices\n", - "Data variables:\n", - " tos (time, nlat, nlon) float32 dask.array\n", - " time_bnds (time, d2) object dask.array\n", - " lat_bnds (time, nlat, nlon, vertices) float32 -79.49 -79.49 ... 72.41\n", - " lon_bnds (time, nlat, nlon, vertices) float32 320.0 321.1 ... 320.0 319.6\n", - " areacello (nlat, nlon) float32 ...\n", - "Attributes: (12/45)\n", - " Conventions: CF-1.7 CMIP-6.2\n", - " activity_id: CMIP\n", - " branch_method: standard\n", - " branch_time_in_child: 674885.0\n", - " branch_time_in_parent: 219000.0\n", - " case_id: 972\n", - " ... ...\n", - " sub_experiment_id: none\n", - " table_id: Omon\n", - " tracking_id: hdl:21.14100/b0ffb89d-095d-4533-a159-a2e1241ff138\n", - " variable_id: tos\n", - " variant_info: CMIP6 20th century experiments (1850-2014) with C...\n", - " variant_label: r11i1p1f1" - ] - }, - "execution_count": 5, - "metadata": {}, - "output_type": "execute_result" - } - ], + "outputs": [], "source": [ - "tos_ds = tos_tree[\"gn\"].to_dataset()\n", - "area_ds = area_tree[\"gn\"].to_dataset()\n", - "\n", - "ds = xr.merge([tos_ds, area_ds])\n", + "ds = tos_tree[\"gn\"].to_dataset()\n", "ds" ] }, @@ -4183,7 +167,7 @@ }, { "cell_type": "code", - "execution_count": 6, + "execution_count": null, "id": "c01c56eb-71b9-4b4b-92c3-31ff3714b55b", "metadata": { "tags": [] @@ -4216,416 +200,12 @@ }, { "cell_type": "code", - "execution_count": 7, + "execution_count": null, "id": "193b0055-35a4-4f48-8d00-b24059f00160", "metadata": { "tags": [] }, - "outputs": [ - { - "data": { - "text/html": [ - "
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