DESCRIPTION

Package: GenomicTuples
Type: Package
Title: Representation and Manipulation of Genomic Tuples
Version: 1.41.1
Date: 2024-11-13
Encoding: UTF-8
Authors@R: c(person("Peter", "Hickey", role = c("aut", "cre"),
    email = "peter.hickey@gmail.com"),
    person("Marcin", "Cieslik", role = "ctb",
    email = "marcin.cieslik@gmail.com"),
    person("Hervé", "Pagès", role = "ctb"))
Description: GenomicTuples defines general purpose containers for storing
    genomic tuples. It aims to provide functionality for tuples of genomic
    co-ordinates that are analogous to those available for genomic ranges in
    the GenomicRanges Bioconductor package.
URL: www.github.com/PeteHaitch/GenomicTuples
BugReports: https://github.com/PeteHaitch/GenomicTuples/issues
biocViews: Infrastructure, DataRepresentation, Sequencing
VignetteBuilder: knitr
Depends:
    R (>= 4.0),
    GenomicRanges (>= 1.37.4),
    GenomeInfoDb (>= 1.15.2),
    S4Vectors (>= 0.17.25)
Imports:
    methods,
    BiocGenerics (>= 0.21.2),
    Rcpp (>= 0.11.2),
    IRanges (>= 2.19.13),
    data.table,
    stats4,
    stats,
    utils
Suggests:
    testthat,
    knitr,
    BiocStyle,
    rmarkdown,
    covr,
    GenomicAlignments,
    Biostrings
LinkingTo: Rcpp
License: Artistic-2.0
Collate:
    'AllGenerics.R'
    'AllUtilities.R'
    'GTuples-class.R'
    'GTuples-comparison.R'
    'GTuplesList-class.R'
    'GenomicTuples.R'
    'RcppExports.R'
    'coverage-methods.R'
    'findOverlaps-methods.R'
    'inter-tuple-methods.R'
    'intra-tuple-methods.R'
    'nearest-methods.R'
    'setops-methods.R'
    'tile-methods.R'
    'zzz.R'
RoxygenNote: 7.2.3