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Blasr : terminate called after throwing an instance of 'std::runtime_error' #149

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anu24s opened this issue May 24, 2019 · 1 comment

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@anu24s
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anu24s commented May 24, 2019

Hi,,, when I am trying to run Blasr-1.3.1 , I get the following error

[INFO] 2019-05-23T11:14:06 [blasr] started.
terminate called after throwing an instance of 'std::runtime_error'
what(): SamWriter: could not write record
Aborted (core dumped)

can anyone help me out on this??

@pb-cdunn
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Hmmm. If you're using Bioconda, try conda update --all. There is only one place now where Blasr is still used, and we have not seen this error. Try going into the run-directory where this happens and look for a stderr file.

(I might not respond again. I just happened to be checking something and noticed this. Good luck!)

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