README.md

Data directory

This directory contains existing data and references files to be added to the SRP analytics database. These data are not private in any way, but mainly serve as reference files for the broader repository.

Data Schema file

Incoming data requires a pre-defined schema so we can validate things BEFORE they are going to be processed by our pipeline. This schema also enables an easy way to check if a file CAN be processed before adding it to the list.

Data file manifest

The data file manifest contains a link to all the other data files, including those referenced in this document. This file can be found here.

Chemical reference information

Many of the build files are actual reference information.

Chemical id file

Chemical classification file

compTox file

Environmental sample information

Sample id file

Existing Zebrafish data