Importing .wiff files produces really weird chromatograms

[the-lion-codes]

When I imported a .wiff file, the produced chromatogram was really strange. There were three issues.

Firstly, the more minor issue is that the chromatogram does not scale and I end up with something that looks like this.

Secondly, I think there is some corruption of data as some of the data more or less disappeared, seen in the discontinuous graph below.

Finally, additional peaks appeared that are not present when viewed using PeakView or SeeMS. This is probably the most important issue...

Hope this can be fixed!

[eselmeister]

Could you send me some test file? Please contact me via: https://lablicate.com/about/contact Best, Philip Am 09.09.20 um 16:34 schrieb SaplingToss:

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When I imported a .wiff file, the produced chromatogram was really strange. There were three issues. Firstly, the more minor issue is that the chromatogram does not scale and I end up with something that looks like this. image <https://user-images.githubusercontent.com/71024128/92612237-43af7f80-f2ec-11ea-9da1-d0d329ea9d4d.png> Secondly, I think there is some corruption of data as some of the data more or less disappeared, seen in the discontinuous graph below. image <https://user-images.githubusercontent.com/71024128/92612390-6a6db600-f2ec-11ea-8373-784adec86d53.png> Finally, additional peaks appeared that are not present when viewed using PeakView or SeeMs. Hope this can be fixed! — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#82>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAFHUT3BNQL5BGCKCLECFKDSE6G5TANCNFSM4RCNLH4Q>.

-- ~~~~~~~~~~~~~~~~~~~~~~~~ OpenChrom - the open source alternative for chromatography / mass spectrometry Dr. Philip Wenig » Founder » [email protected] » http://www.openchrom.net ~~~~~~~~~~~~~~~~~~~~~~~~

[the-lion-codes]

Hi Phillip, I have attached a .wiff file. Ryan

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On Wed, Sep 9, 2020 at 10:50 PM eselmeister ***@***.***> wrote: Could you send me some test file? Please contact me via: https://lablicate.com/about/contact Best, Philip Am 09.09.20 um 16:34 schrieb SaplingToss: > > When I imported a .wiff file, the produced chromatogram was really > strange. There were three issues. > > Firstly, the more minor issue is that the chromatogram does not scale > and I end up with something that looks like this. > image > < https://user-images.githubusercontent.com/71024128/92612237-43af7f80-f2ec-11ea-9da1-d0d329ea9d4d.png > > > Secondly, I think there is some corruption of data as some of the data > more or less disappeared, seen in the discontinuous graph below. > image > < https://user-images.githubusercontent.com/71024128/92612390-6a6db600-f2ec-11ea-8373-784adec86d53.png > > > Finally, additional peaks appeared that are not present when viewed > using PeakView or SeeMs. > > Hope this can be fixed! > > — > You are receiving this because you are subscribed to this thread. > Reply to this email directly, view it on GitHub > <#82>, or unsubscribe > < https://github.com/notifications/unsubscribe-auth/AAFHUT3BNQL5BGCKCLECFKDSE6G5TANCNFSM4RCNLH4Q >. > -- ~~~~~~~~~~~~~~~~~~~~~~~~ OpenChrom - the open source alternative for chromatography / mass spectrometry Dr. Philip Wenig » Founder » ***@***.*** » http://www.openchrom.net ~~~~~~~~~~~~~~~~~~~~~~~~ — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#82 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AQ534ADLN4BMVBJBV6XISHLSE6I2FANCNFSM4RCNLH4Q> .

[eselmeister]

@SaplingToss Does the *.wiff file has been sorted out by GitHub?

[the-lion-codes]

@eselmeister Yes I think it was blocked. The .wiff file comes in 2 parts, I will zip them and upload.
test.zip

[eselmeister]

Alternatively, you could also provide it via DropBox or similar. Am 09.09.20 um 18:40 schrieb SaplingToss:

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@eselmeister <https://github.com/eselmeister> Yes I think it was blocked. The .wiff file comes in 2 parts, I will zip them and upload. test.zip <https://github.com/OpenChrom/openchrom/files/5196700/test.zip> — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#82 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAFHUT7B7LKCFKS7RRHRDXLSE6VYBANCNFSM4RCNLH4Q>.

-- ~~~~~~~~~~~~~~~~~~~~~~~~ OpenChrom - the open source alternative for chromatography / mass spectrometry Dr. Philip Wenig » Founder » [email protected] » http://www.openchrom.net ~~~~~~~~~~~~~~~~~~~~~~~~

[the-lion-codes]

I uploaded it in my previous comment, can you see the zip file?