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Using the dev branch, the PyNWB validator is not using cached extensions during validation. I think that is because we are using the validate(io=io) method instead of the validate(paths=paths) method.
Have you ensured this bug was not already reported?
To the best of your ability, have you ensured this is a bug within the code that checks the NWBFile, rather than a bug in the NWBFile reader (e.g., PyNWB or MatNWB)?
The text was updated successfully, but these errors were encountered:
What happened?
Using the dev branch, the PyNWB validator is not using cached extensions during validation. I think that is because we are using the
validate(io=io)
method instead of thevalidate(paths=paths)
method.https://github.com/NeurodataWithoutBorders/nwbinspector/blame/ba7d845b255e8095c72978e91b2c014675ef55d6/src/nwbinspector/_nwb_inspection.py#L277
This appears to have been changed recently to support validation with Zarr.
See also NeurodataWithoutBorders/pynwb#1777
I will look into solutions. We should add a test for this.
Operating System
macOS
Python Version
3.12
Were you streaming with ROS3?
No
Package Versions
No response
Code of Conduct
The text was updated successfully, but these errors were encountered: