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Remote hackathon

Welcome to the 2nd NWB Docathon!

Dates and Location

  • Dates: September 22-23, 2022
  • Location: Anywhere with an internet connection

Overview

The workshop will focus primarily on improving documentation and tutorials for the NWB APIs, schema, and community tools that use NWB.

Registration

Please complete the registration form to attend the event.

Logistics

We will be using the Gather spatial chat platform for most of the meeting. We will be using the Zoom videoconferencing platform for the breakout sessions. We will send an email in the week before the workshop with the meeting links.

Gather Platform

In Gather, you control a video-game-like avatar with your arrow keys. When your avatar is near another attendee's avatar, their video will appear and you will be able to speak with them. This platform allows for many small-group or one-on-one conversations to occur simultaneously and spontaneously. We hope that Gather will emulate the free-flowing social interactions of an in-person hackathon better than having everyone in a single Zoom meeting or messaging over Slack.

We have a few tips for using Gather, especially if it is your first time:

  • Sign in to the space before the meeting and practice using the controls.
  • Use a desktop/laptop computer, not a mobile device. Chrome seems to works best. The desktop app also works.
  • This is not a 20+ person Zoom call. You can "walk" up to different people and communicate with only the people within a few tiles from your avatar.
  • Shaded areas are "private spaces" - only people inside the private space can see and hear you. There are private spaces for each breakout room, each table/desk, and the main stage area.
  • While you are hacking, we recommend that you keep Gather open in the background with your speakers/audio on, so that others can more easily reach you. This will help us better emulate an in-person hackathon where everyone is approachable. Feel free to mute yourself and turn off your video when you are not interacting with anyone.
  • Click on a name in the People panel (bottom-left button) to send them a message or locate them.
  • We recommend that you keep the Chat panel on the left open in case someone messages you.
  • If you are leaving your computer for a prolonged period, please close the browser to make your avatar leave the space.
  • You can click the arrow icon in the top right of the video feed to make everyone’s videos bigger. You can also click your name at the bottom of the screen, User/Video preferences, and Use HD Video Quality for better video.

Zoom Platform

It is possible to use Zoom from the browser, but we recommend you install the Zoom app on your computer. See installation instructions here.

Organizing Committee

Program chairs: Oliver Ruebel, Benjamin Dichter, Ryan Ly, and Matthew Avaylon

Additional organizational support is provided by the Kavli Foundation.

Resources

Recorded talks will be uploaded after the talks are given.

How to prepare?

Install the Python or MATLAB software for NWB:

Projects

If you have a specific project you would like to work on, please add it to this google doc.

Objective

The Neurodata Without Borders project (NWB, https://www.nwb.org/) is an effort to standardize the description and storage of neurophysiology data and metadata. NWB enables data sharing and reuse and reduces the energy barrier to applying data analysis both within and across labs. Several laboratories, including the Allen Institute for Brain Science, have wholeheartedly adopted NWB. The community needs to join forces to achieve data standardization in neurophysiology.

The purpose of the NWB Docathon to bring users and developers of the experimental neurophysiology community together to improve documentation and tutorials for the NWB APIs, schema, and community tools that use NWB.

Agenda

{% include_relative agenda/AGENDA.md %}

Code of Conduct

We are dedicated to providing a harassment-free event experience for everyone, regardless of gender, gender identity and expression, sexual orientation, disability, physical appearance, body size, race, age or religion. We do not tolerate harassment of event participants in any form. Sexual language and imagery is not appropriate for any event venue, including talks. event participants violating these rules may be sanctioned or expelled from the event without a refund at the discretion of the event organizers.

Harassment includes, but is not limited to:

Verbal comments that reinforce social structures of domination related to gender, gender identity and expression, sexual orientation, disability, physical appearance, body size, race, age or religion. Sexual images in public spaces Deliberate intimidation, stalking, or following Harassing photography or recording Sustained disruption of talks or other events Inappropriate physical contact Unwelcome sexual attention Advocating for, or encouraging, any of the above behaviour Enforcement Participants asked to stop any harassing behavior are expected to comply immediately.

Organizers and presenters are also subject to the anti-harassment policy. In particular, they should not use sexualized images, activities, or other material.

Event organisers may take action to redress anything designed to, or with the clear impact of, disrupting the event or making the environment hostile for any participants.

If a participant engages in harassing behaviour, event organisers have the responsibility to remind the offender about our Code of Conduct, and warn them that repeated inappropriate, uncivil, threatening, offensive, or harmful behavior can lead to a temporary or permanent ban from the event with no refund. The offending person(s) may also see affected their participation in future NWB and DANDI events.

We expect participants to follow these rules at all event venues and event-related social activities. We think people should follow these rules outside event activities too!

Reporting

If someone makes you or anyone else feel unsafe or unwelcome, please report it as soon as possible to the events organizers. Harassment and other code of conduct violations reduce the value of our event for everyone. We want you to be happy at our event. People like you make our event a better place.

You can make a report either with your personal email or using an anonymous email.

NWB Contributor Code of Conduct

When directly contributing to the NWB project, contributors are expected to follow the NWB Contributor Code of Conduct

Credit

This hackathon code of conduct is adapted from the Brainhack Code of Conduct.

Disclaimer

This website and related content were prepared as an account of or to expedite work sponsored at least in part by the United States Government. While we strive to provide correct information, neither the United States Government nor any agency thereof, nor The Regents of the University of California, nor any of their employees, makes any warranty, express or implied, or assumes any legal responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed, or represents that its use would not infringe privately owned rights.

Reference herein to any specific commercial product, process, or service by its trade name, trademark, manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency thereof, or The Regents of the University of California. Use of the Laboratory or University’s name for endorsements is prohibited.

The views and opinions of authors expressed herein do not necessarily state or reflect those of the United States Government or any agency thereof or The Regents of the University of California. Neither Berkeley Lab nor its employees are agents of the US Government.

Berkeley Lab web pages link to many other websites. Such links do not constitute an endorsement of the content or company and we are not responsible for the content of such links.