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Issue with PMC ID in ARAX response #943

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dnsmith124 opened this issue Sep 10, 2024 · 3 comments
Open

Issue with PMC ID in ARAX response #943

dnsmith124 opened this issue Sep 10, 2024 · 3 comments
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bug Something isn't working pathfinder

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@dnsmith124
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Submitted the following through the UI: https://ui.ci.transltr.io/pathfinder/results?lone=ACE&ltwo=Enalapril&ione=NCBIGene:1636&itwo=CHEBI:4784&t=p&r=0&q=2ad6a7e8-d15f-4e94-8360-9a921b16bf59

The edge "ACE Associated With Coronary Artery Disorder" has a single publication that points to a broken link, and the UI is unable to retrieve metadata for the provided publication ID:
Screenshot 2024-09-10 at 10 15 19 AM

After reviewing in ARAX, this is because the provided PMC ID is improperly formatted:
Screenshot 2024-09-10 at 10 13 38 AM

@dnsmith124 dnsmith124 added the bug Something isn't working label Sep 10, 2024
@andrewsu
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image

This one comes from Multiomics KP, so assigning to @gglusman

@gglusman
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Thanks @andrewsu !
@dnsmith124 The PMC curie PMC:PMC10567551 is properly formatted in the KP. Not sure where the URL is built from it, but that code seems to be dropping the colon between the prefix PMC and the value PMC10567551.

@dnsmith124
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Thanks @gglusman, it must be an issue with the UI's processing of results. @gprice1129 can you take a look?

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