pyproject.toml

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[project]
name = "marsilea"
authors = [
    {name = "Mr-Milk", email = "yzheng@cemm.at"},
    {name = "Zhihang Zheng"}
]
license = {file = "LICENSE"}
readme = "README.md"
classifiers = [
    "License :: OSI Approved :: MIT License",
    "Programming Language :: Python :: 3",
    "Framework :: Matplotlib",
]
dynamic = ["version", "description"]
requires-python = ">=3.8"
urls = {Home="https://github.com/Marsilea-viz/marsilea"}
dependencies = [
    "numpy",
    "pandas[parquet]",
    "matplotlib>=3.6",
    "seaborn",
    "scipy",
    "legendkit",
    "platformdirs"
]

[project.optional-dependencies]
dev = [
    "ruff",
    "icecream",
    "python-hmr",
    "pytest",
    "scikit-learn",
    "sphinx",
    "numpydoc",
    "sphinx_design",
    "pydata-sphinx-theme",
    "sphinx-copybutton",
    "sphinx_gallery",
    "mpl_fontkit",
    "pre-commit",
]

[tool.hatch.version]
path = "src/marsilea/__init__.py"

[tool.hatch.build.targets.wheel]
packages = ["src/marsilea", "src/oncoprinter"]

[tool.hatch.build.targets.sdist]
exclude = [
    "docs",
    "app",
    "data",
    "img",
    "tests",
    "scripts",
    "readthedocs.yaml",
]
include = [
    "README.md",
    "LICENSE",
    "pyproject.toml",
    "setup.py",
    "src/marsilea",
    "src/oncoprinter",
]

[tool.ruff.format]
docstring-code-format = true

[tool.ruff.lint.per-file-ignores]
"__init__.py" = ["F401"]
"docs/*" = ["E402", "E731"]
"scripts/*" = ["E402", "E731"]