From 2a5d0c329308bbcc50a8716f203e3e95c44b6bc7 Mon Sep 17 00:00:00 2001
From: Xiaoyu Chen <xchen@illumina.com>
Date: Fri, 11 Nov 2016 14:06:48 -0800
Subject: [PATCH] update cl

---
 ChangeLog.txt                        | 3 +++
 src/c++/lib/manta/SVLocusScanner.cpp | 3 +--
 2 files changed, 4 insertions(+), 2 deletions(-)

diff --git a/ChangeLog.txt b/ChangeLog.txt
index 5ebcb81c..bffd33f3 100644
--- a/ChangeLog.txt
+++ b/ChangeLog.txt
@@ -1,3 +1,6 @@
+v1.0.3
+- MANTA-302 fix the bug of duplicate variant ID
+- MANTA-279 fix the bug of reporting variants beyond chromosome end position
 v1.0.2
 - SPW-316 update denovo scoring script to write valide vcf when the input vcf contains more than three samples
 - Remove old/unused reference utility functions
diff --git a/src/c++/lib/manta/SVLocusScanner.cpp b/src/c++/lib/manta/SVLocusScanner.cpp
index 9c38fe96..4e572a42 100644
--- a/src/c++/lib/manta/SVLocusScanner.cpp
+++ b/src/c++/lib/manta/SVLocusScanner.cpp
@@ -650,9 +650,8 @@ struct AlignmentPairAnalyzer
             if (remoteAlign().pos <= 0) return true;
         }
 
-
         return false;
-    };
+    }
 
 
     /// return the amount of unaligned sequence proceding the pair insert: