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There are several tests (marked with todo in test_metrics.py which are not adequately tested because the metadata contains no examples of what they measure.
For example:
multi-aligned reads
incorrect cell barcodes
reads mapping to UTR or intronic regions
multi-mapping reads
There are several metrics which were inconsistent with notebook versions:
molecule_barcode_fraction_bases_above_30_variance
reads_per_molecule
fragments_per_molecule
cell metrics fragments_with_single_read_evidence
cell metrics molecules_with_single_read_evidence
The text was updated successfully, but these errors were encountered:
There are several tests (marked with
todo
intest_metrics.py
which are not adequately tested because the metadata contains no examples of what they measure.For example:
There are several metrics which were inconsistent with notebook versions:
molecule_barcode_fraction_bases_above_30_variance
reads_per_molecule
fragments_per_molecule
fragments_with_single_read_evidence
molecules_with_single_read_evidence
The text was updated successfully, but these errors were encountered: