Release v2.16.0

[cmdcolin]

This release adds the long awaited ability to visualize "multi-way" synteny using a "series of pairwise" comparisons!

Screenshot of grape vs peach vs cacao

Example link here
https://jbrowse.org/code/jb2/main/?config=%2Fdemos%2Fplant_synteny_demo%2Fconfig2.json&session=share-OzIsqrPjDb&password=0T2Qs

Setting up multi-way synteny views can be performed from the "import form" or via the URL params. We envision further enhancements to come to improve functionality and ease-of-use of these views also.

Screenshot of the multi-way import form

2.16.0 (2024-10-23)

🚀 Enhancement

• Other
  • #4615 Add configuration of transcriptTypes and containerTypes to the svg feature rendering (@cmdcolin)
• app-core, core
  • #4430 Multi-level synteny rendering (@cmdcolin)

🐛 Bug Fix

• Other
  • #4593 Fix navigating to a refname result that is also indexed in search track index (@cmdcolin)
  • #4612 Fix error with tooltips in embedded components in vite dev mode (@cmdcolin)
  • #4602 Fix decoding of CRAM ML tag (@cmdcolin)
  • #4594 Fix highlight button causing issues clicking underlying track features (@cmdcolin)
  • #4586 Update electron-builder to fix broken desktop builds (@cmdcolin)
• core
  • #4600 Fix check for "hasSubSubfeatures" in svg feature rendering (@cmdcolin)
  • #4590 Fix opening .jbrowse files on desktop (@cmdcolin)

📝 Documentation

• #4607 Add tiberius sample dataset and updated gencode and ncbi GFF gene sets (@cmdcolin)

🏠 Internal

• Other
  • #4607 Add tiberius sample dataset and updated gencode and ncbi GFF gene sets (@cmdcolin)
• app-core, core, embedded-core, product-core, web-core
  • #4606 Remove react-error-boundary (@cmdcolin)

Committers: 1

• Colin Diesh (@cmdcolin)

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This discussion was created from the release Release v2.16.0.