diff --git a/NAMESPACE b/NAMESPACE index b962f21..c0af8d7 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -32,8 +32,10 @@ export(mean_ligand_expression) export(mock_linkage_summary) export(obtain_circos_expression) export(plot_differential_linkages) +export(query_ligand_senders) export(rename_clusters) export(render_circos_ligand_receptor) +export(senders_as_vector) export(signaling_heatmap) export(signaling_network) export(summarize_linkages) diff --git a/R/ligand_source_fxns.R b/R/ligand_source_fxns.R index 804d5b8..87d0a01 100644 --- a/R/ligand_source_fxns.R +++ b/R/ligand_source_fxns.R @@ -61,7 +61,7 @@ find_outgoing_ligands <- function(dom, signal_threshold = 0) { #' } #' @param receiver_cell name of the receiving cluster whose receptors will be used #' @return list of incoming ligands to the recipient cell type organized by their receptor -#' @keywords internal +#' @export #' #' @examples #' example(build_domino) @@ -106,7 +106,7 @@ query_ligand_senders <- function(dom, outgoing_list, receiver_cell) { #' @param receiver_cell name of the receiving cluster #' @param receptor name of the receptor receiving signals #' @return vector of intercellular linkages for each sender cell and active ligand -#' @keywords internal +#' @export #' #' @examples #' example(build_domino) diff --git a/man/query_ligand_senders.Rd b/man/query_ligand_senders.Rd index 84ecd11..39da0b3 100644 --- a/man/query_ligand_senders.Rd +++ b/man/query_ligand_senders.Rd @@ -34,4 +34,3 @@ query_ligand_senders( ) } -\keyword{internal} diff --git a/man/senders_as_vector.Rd b/man/senders_as_vector.Rd index cf1f293..1be6e72 100644 --- a/man/senders_as_vector.Rd +++ b/man/senders_as_vector.Rd @@ -35,4 +35,3 @@ senders_as_vector( } -\keyword{internal}