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Derrida Value #187

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dglmoore opened this issue Oct 9, 2019 · 0 comments
Open

Derrida Value #187

dglmoore opened this issue Oct 9, 2019 · 0 comments

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@dglmoore
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dglmoore commented Oct 9, 2019

Description

The Derrida value of a boolean network is a weighted sum of c-sensitivities (#109) for c=0...m. It is a well-established measure of criticality.

Proposed API

class SensitivityMixin(object):
    def derrida(m=1, transitions=None):
        pass

Example Usage

from neet.boolean.examples import s_pombe
s_pombe.derrida()
s_pombe.derrida(m = 5)

References

Theorem 4.3 of

Kadelka C, Kuipers J, Laubenbacher R. The influence of canalization on the robustness of Boolean networks. Physica D. 2017;353-354: 39–47. doi:10.1016/j.physd.2017.05.002.

@dglmoore dglmoore added this to the v1.1.0 milestone Oct 9, 2019
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