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Warning cloning the repo on mac #757

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jamesamcl opened this issue Oct 3, 2024 · 1 comment
Open

Warning cloning the repo on mac #757

jamesamcl opened this issue Oct 3, 2024 · 1 comment
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bug Medium priority Affects more than one ontology with mild reduction in usability

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@jamesamcl
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It seems like there are some files which have the same name but differ only by case, which doesn't work on mac (and I assume windows):

warning: the following paths have collided (e.g. case-sensitive paths
on a case-insensitive filesystem) and only one from the same
colliding group is in the working tree:

  'testcases_expected_output_api/ontologies/individuals-anonymous-types-with-inverse/entities/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Findividuals%252Fanonymous-types-with-inverse.owl%2523A.json'
  'testcases_expected_output_api/ontologies/individuals-anonymous-types-with-inverse/entities/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Findividuals%252Fanonymous-types-with-inverse.owl%2523a.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTRUE.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTrue.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTRUE/ancestors.json'  

'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTrue/ancestors.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTRUE/children.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTrue/children.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTRUE/descendants.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTrue/descendants.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTRUE/hierarchicalAncestors.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTrue/hierarchicalAncestors.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTRUE/hierarchicalChildren.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTrue/hierarchicalChildren.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTRUE/hierarchicalDescendants.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTrue/hierarchicalDescendants.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTRUE/hierarchicalParents.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTrue/hierarchicalParents.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTRUE/parents.json'
  'testcases_expected_output_api/ontologies/isobsolete/terms/http%253A%252F%252Fwww.ebi.ac.uk%252Ftestcases%252Fdefined-fields%252FisObsolete.rdf%2523DeprecatedClassWithValueTrue/parents.json'
@jamesamcl jamesamcl added the bug label Oct 3, 2024
@henrietteharmse
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Nice catch!

@henrietteharmse henrietteharmse added the Medium priority Affects more than one ontology with mild reduction in usability label Oct 4, 2024
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Labels
bug Medium priority Affects more than one ontology with mild reduction in usability
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