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Need to QC non-rsID type variant IDs #14

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jdhayhurst opened this issue Feb 18, 2021 · 0 comments
Open

Need to QC non-rsID type variant IDs #14

jdhayhurst opened this issue Feb 18, 2021 · 0 comments
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@jdhayhurst
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Currently variants that are not rsIDs are not checked in the final qc steps (the steps that check if it's synonymous with the provided variant ID). This means that ids such as TMP_ESP ids that do exist in the Ensembl reference, are not checked.
@jdhayhurst jdhayhurst self-assigned this Feb 18, 2021
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