DESCRIPTION

Package: KRSA
Title: KRSA: Kinome Random Sampling Analyzer
Version: 1.99.42
Authors@R:
    c(person(c("Ali", "Sajid"), "Imami", , "Ali.Sajid.Imami@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0003-3684-3539")),
    person(c("Khaled"), "Alganem", ,"khaled.a.alganem@gmail.com" ,role = "aut", comment = c(ORCID = "0000-0003-4419-3708")))
Description: The goal of this package is to analyze the PamChip data and identify the changes in the active kinome.
        The package can preprocess the PamChip data output from BioNavigator and use Random Sampling and Permutation Analysis
        to identify upstream kinases. Additionally, this package provides a set of useful visualizations for the PamChip data.
License: MIT + file LICENSE
URL: https://github.com/CogDisResLab/KRSA, https://cogdisreslab.github.io/KRSA/
Encoding: UTF-8
Imports:
    magrittr,
    tibble,
    readr,
    stringr,
    purrr,
    rlang,
    dplyr,
    pheatmap,
    EnvStats,
    broom,
    igraph,
    stats,
    utils,
    ggplot2,
    tidyr,
    ggsignif,
    httr,
    jsonlite
Depends:
    R (>= 4.0.0)
Suggests:
    knitr,
    rmarkdown,
    markdown,
    tidyverse,
    gt,
    furrr,
    biocthis,
    usethis,
    gganimate
BugReports: https://github.com/CogDisResLab/KRSA/issues
biocViews: Software
VignetteBuilder: knitr
X-schema.org-applicationCategory: Proteomics
X-schema.org-keywords: Kinase, Phosphatases, PamChip, Kinome,
    Random Sampling, Permutation Analysis
X-schema.org-isPartOf: https://cdrlprojects.org/
Config/testthat/edition: 3
Config/testthat/parallel: TRUE
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
LazyData: true