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shared object undefined symbol after install #89

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fearon10 opened this issue Jan 6, 2025 · 1 comment
Open

shared object undefined symbol after install #89

fearon10 opened this issue Jan 6, 2025 · 1 comment

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@fearon10
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fearon10 commented Jan 6, 2025

Hi,

I'm just getting started with the tempest-extremes code. I followed the recommendations and installed using conda:

conda install -c conda-forge tempest-extremes

The install appeared to work without issue, however, when I test a few a functions I receive the followed undefined symbol issue

DetectBlobs:
libnetcdf.so.19: undefined symbol: H5Pset_fapl_ros3

Thanks for the assistance,
Matt

@fearon10
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fearon10 commented Jan 7, 2025

Hi,
I could not resolve this conda install issue. Therefore, I installed the code from source. Once installed, I hit the regex exception issue: #50 . I used the suggested workaround of omitting the "--timefilter" option and specifying the exact input file list. I'm using ERA5 data with DetectBlobs and being a new user I've learned I don't have the exact netcdf attribute names expected, e.g., lat vs latitude. Looking through the documentation, and perhaps I missed it, I don't see examples of the expected file layout; it's a bit of trial and error. I'll keep tinkering.

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