FATAL from PE 43: file/field /g/data/qw43/ct2143/Input/Wave_input/hs_fixed.nc/HS couldnt recognize axis atts in time_interp_external

[ctensubam]

Hi everyone,
I have been trying to include surface wave turbulence in ACCESS-OM2 by forcing Significant wave height (HS) and Peak frequency (fp_peak) data. When I try to run, the model exited throwing this error:
'FATAL from PE 43: file/field /g/data/qw43/ct2143/Input/Wave_input/hs_fixed.nc/HS couldnt recognize axis atts in time_interp_external'
I can understand that some of input data attributes are not recognised by ACCESS-OM2. However, I change the input attributes using a reference file 'ocean_temp_salt.res.nc' from ACCESS-OM2. I am still unable to fix this issue.
Kindly help!

An overview of my input file is given below:
[ct2143@gadi-login-05 Wave_input]$ ncdump -h hs_fixed.nc
netcdf hs_fixed {
dimensions:
time = UNLIMITED ; // (2920 currently)
GRID_X_T = 1440 ;
GRID_Y_T = 1080 ;
variables:
double time(time) ;
time:long_name = "time" ;
time:units = "days since 2015-01-01 00:00:00" ;
time:cartesian_axis = "T" ;
time:calendar_type = "GREGORIAN" ;
time:calendar = "GREGORIAN" ;
double GRID_X_T(GRID_X_T) ;
GRID_X_T:standard_name = "longitude" ;
GRID_X_T:long_name = "longitude" ;
GRID_X_T:units = "degree_east" ;
GRID_X_T:axis = "X" ;
GRID_X_T:point_spacing = "even" ;
double GRID_Y_T(GRID_Y_T) ;
GRID_Y_T:standard_name = "latitude" ;
GRID_Y_T:long_name = "latitude" ;
GRID_Y_T:units = "degree_north" ;
GRID_Y_T:axis = "Y" ;
GRID_Y_T:point_spacing = "uneven" ;
short MAPSTA(GRID_Y_T, GRID_X_T) ;
MAPSTA:standard_name = "status map" ;
MAPSTA:long_name = "status map" ;
MAPSTA:units = "1" ;
short HS(time, GRID_Y_T, GRID_X_T) ;
HS:standard_name = "sea_surface_wave_significant_height" ;
HS:long_name = "significant height of wind and swell waves" ;
HS:units = "m" ;
HS:add_offset = 0.f ;
HS:scale_factor = 0.002f ;
HS:_FillValue = -32767s ;
HS:missing_value = -32767s ;
HS:globwave_name = "significant_wave_height" ;

[russfiedler]

The files require the attribute cartesian_axis="X" (or "Y") for the axes GRID_X_T and GRID_Y_T not axis

[ctensubam]

Thanks russfielder,
The previous error has been fixed now. However, it throws another error which says:

access-om2_err.txt
forrtl: severe (66): output statement overflows record, unit -5, file Internal Formatted Write
Image PC Routine Line Source
fms_ACCESS-OM-BGC 0000000001C7396B Unknown Unknown Unknown
fms_ACCESS-OM-BGC 0000000001CC7EDF Unknown Unknown Unknown
fms_ACCESS-OM-BGC 000000000181EEB2 time_interp_exter 577 time_interp_external.F90
fms_ACCESS-OM-BGC 00000000017E1537 data_override_mod 708 data_override.F90
fms_ACCESS-OM-BGC 00000000017E7D6B data_override_mod 521 data_override.F90
fms_ACCESS-OM-BGC 00000000011F4B4F ocean_vert_gotm_m 839 ocean_vert_gotm.F90
fms_ACCESS-OM-BGC 0000000000B0757E ocean_vert_mix_mo 3125 ocean_vert_mix.F90
fms_ACCESS-OM-BGC 000000000042CE57 ocean_model_mod_m 1634 ocean_model.F90
fms_ACCESS-OM-BGC 0000000000422212 MAIN__ 468 ocean_solo.F90
fms_ACCESS-OM-BGC 000000000040F6A2 Unknown Unknown Unknown
libc-2.28.so 000014E13084F493 __libc_start_main Unknown Unknown
fms_ACCESS-OM-BGC 000000000040F5AE Unknown Unknown Unknown

The full error file is attached herewith. In my experiment, I have changed three fortran files which are ocean_vert_gotm.F90, turbulence.F90 and production.F90 and recompiled the codes. Could you please identify the cause of the errors.

[ctensubam]

I have another question which is:
When I tried to run ACCESS-OM2 with BGC configuration given here https://github.com/COSIMA/025deg_jra55_iaf/tree/master+bgc using my own ocean executable (/g/data/qw43/ct2143/ACCESS-OM2/access-om2/bin/fms_ACCESS-OM-BGC_af3a94d-modified_libaccessom2_a227a61.x
) from my experiment, the model throws an error saying;
'FATAL from PE 0: MPP_OPEN:INPUT/ocmip2_press_monthly_om2.nc does not exist.'
Though, I used the same INPUT directories I am still wonder why it is not working with my executable. This error doesn't pop up if I use the default executable.

I have checked field_table file and found three extra files are need to run with bgc modules which are 'ocmip2_press_monthly_om2.nc', 'ocmip2_xkw_monthly_om2.nc', and 'ocmip2_fice_monthly_om1p5_bc.nc'

I can't find these files in ACCESS-OM2 input directories mentioned in config.yaml file.
So, I am wondering, is the error due to my executable I used? if not, Where can I find these three input file?

Regards
Chinglen