diff --git a/api/test_data/readmes/PORTAL_ALL_METADATA.md b/api/test_data/readmes/PORTAL_ALL_METADATA.md new file mode 100644 index 00000000..5df9c71e --- /dev/null +++ b/api/test_data/readmes/PORTAL_ALL_METADATA.md @@ -0,0 +1,53 @@ +Generated on: TEST_TODAYS_DATE + +# Alex's Lemonade Stand Foundation Single-cell Pediatric Cancer Atlas + +The [Single-cell Pediatric Cancer Atlas](https://scpca.alexslemonade.org) is a database of single-cell and single-nuclei data from pediatric cancer clinical samples and xenografts, built by the [Childhood Cancer Data Lab](https://www.ccdatalab.org/) at [Alex's Lemonade Stand Foundation](https://www.alexslemonade.org/). + +## Contents + +This download includes associated metadata for samples from all projects currently available at time of download in the ScPCA portal. + +The metadata included in this download contains sample, library, and project-related metadata (e.g., age, sex, diagnosis, sequencing unit, etc.) along with any relevant processing metadata (e.g., software versions, filtering methods used, etc.). + +See the [Downloadable files](https://scpca.readthedocs.io/en/stable/download_files.html) section in our documentation for more detailed information on files included in the download. + +## CHANGELOG + +A summary of changes impacting downloads from the ScPCA Portal is available in [the CHANGELOG section of our documentation](https://scpca.readthedocs.io/en/stable/CHANGELOG.html). + +## Contact + +If you identify issues with this download, please [file an issue on GitHub.](https://github.com/AlexsLemonade/scpca-portal/issues/new) If you would prefer to report issues via e-mail, please contact us at [scpca@ccdatalab.org](mailto:scpca@ccdatalab.org). + +## Citation + +If you use these data in your research, you must cite: +- The data submitter using language provided as part of the project abstract (as applicable), the publication listed for the project (as applicable), or both. +- The ScPCA Portal using the language below. + +For more information, please see [the How to Cite section of our documentation](https://scpca.readthedocs.io/en/stable/citation.html). + +### Citing this project + +To cite data from PROJECT_ID_0, please see the project abstract and publication information at [PROJECT_ID_0 page.](https://scpca.alexslemonade.org/projects/PROJECT_ID_0) +To cite data from PROJECT_ID_1, please see the project abstract and publication information at [PROJECT_ID_1 page.](https://scpca.alexslemonade.org/projects/PROJECT_ID_1) +To cite data from PROJECT_ID_2, please see the project abstract and publication information at [PROJECT_ID_2 page.](https://scpca.alexslemonade.org/projects/PROJECT_ID_2) + +### Citing the ScPCA Portal + +When citing the ScPCA Portal, please cite the following preprint: + +Hawkins A. G., J. A. Shapiro, S. J. Spielman, D. S. Mejia, D. V. Prasad, et al., 2024 The Single-cell Pediatric Cancer Atlas: Data portal and open-source tools for single-cell transcriptomics of pediatric tumors. _bioRxiv._ https://doi.org/10.1101/2024.04.19.590243 + +## Terms of Use + +In using these data, you agree to our [Terms of Use](https://scpca.alexslemonade.org/terms-of-use). + +### Additional Restrictions + +|Project ID|Data Usage Restrictions| +|:---------|:----------------------| +|[PROJECT_ID_0](https://scpca.alexslemonade.org/projects/PROJECT_ID_0)|Research or academic purposes only| +|[PROJECT_ID_1](https://scpca.alexslemonade.org/projects/PROJECT_ID_1)|Research or academic purposes only| +|[PROJECT_ID_2](https://scpca.alexslemonade.org/projects/PROJECT_ID_2)|Research or academic purposes only|