From 690904ab4ecb7e4c6f11112c2a3dd84a5e3496b9 Mon Sep 17 00:00:00 2001 From: dougiesquire Date: Wed, 27 Mar 2024 17:10:28 +1100 Subject: [PATCH] Configure WOMBATlite --- MOM_input | 3 ++ config.yaml | 12 ++++- data_table | 8 +++ diag_table | 81 ++++++++++++++++++++++++++++++ field_table | 115 +++++++++++++++++++++++++++++++++++++++++++ input.nml | 10 ++++ manifests/input.yaml | 50 +++++++++++++++++++ nuopc.runconfig | 1 + 8 files changed, 279 insertions(+), 1 deletion(-) create mode 100644 data_table create mode 100644 field_table diff --git a/MOM_input b/MOM_input index eb81b60..20cbfa8 100644 --- a/MOM_input +++ b/MOM_input @@ -151,6 +151,9 @@ EPS_OMESH = 1e-13 ! === module MOM_tracer_flow_control === USE_IDEAL_AGE_TRACER = True ! [Boolean] default = False ! If true, use the ideal_age_example tracer package. +USE_generic_tracer = True ! [Boolean] default = False + ! If true and _USE_GENERIC_TRACER is defined as a preprocessor macro, use the + ! MOM_generic_tracer packages. ! === module ideal_age_example === diff --git a/config.yaml b/config.yaml index 0ff9d28..c797e48 100644 --- a/config.yaml +++ b/config.yaml @@ -14,7 +14,7 @@ jobfs: 10GB mem: 192GB walltime: 01:00:00 -jobname: 1deg_jra55do_ryf +jobname: 1deg_jra55do_ryf_wombatlite model: access-om3 @@ -25,12 +25,22 @@ input: - /g/data/vk83/experiments/inputs/access-om3/share/meshes/share/2024.01.25/JRA55do-ESMFmesh.nc - /g/data/vk83/experiments/inputs/access-om3/share/grids/global.1deg/2020.10.22/topog.nc - /g/data/vk83/experiments/inputs/access-om3/mom/grids/mosaic/global.1deg/2020.05.30/ocean_hgrid.nc + - /g/data/vk83/experiments/inputs/access-om3/mom/grids/mosaic/global.1deg/2020.05.30/ocean_mosaic.nc + - /g/data/vk83/experiments/inputs/access-om3/mom/grids/mosaic/global.1deg/2024.05.08/grid_spec.nc - /g/data/vk83/experiments/inputs/access-om3/mom/grids/vertical/global.1deg/2023.07.28/ocean_vgrid.nc - /g/data/vk83/experiments/inputs/access-om3/mom/initial_conditions/global.1deg/2020.10.22/ocean_temp_salt.res.nc - /g/data/vk83/experiments/inputs/access-om3/mom/surface_salt_restoring/global.1deg/2020.05.30/salt_sfc_restore.nc - /g/data/vk83/experiments/inputs/access-om3/cice/grids/global.1deg/2024.05.14/grid.nc - /g/data/vk83/experiments/inputs/access-om3/cice/grids/global.1deg/2024.05.14/kmt.nc - /g/data/vk83/experiments/inputs/access-om3/cice/initial_conditions/global.1deg/2023.07.28/iced.1900-01-01-10800.nc + - /g/data/vk83/experiments/inputs/access-om3/wombat/forcing/global.1deg/2022.02.24/dust.nc + - /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2021.06.07/FEMIP_model_median_iron_2016_fillmiss.nc + - /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.NO3_fillmiss.nc + - /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.oxygen_fillmiss.nc + - /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.PI_TCO2_fillmiss.nc + - /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.TAlk_fillmiss.nc + - /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.TCO2_fillmiss.nc + - /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/init_ocean_wombatlite.res.nc - /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data collate: false diff --git a/data_table b/data_table new file mode 100644 index 0000000..5ef1c7e --- /dev/null +++ b/data_table @@ -0,0 +1,8 @@ +# MOM/FMS data table +# +# gridname | fieldname_code | fieldname_file | file_name | ongrid | factor +# --------------------------------------------------------------------------------------------------------------------------------- +"OCN" , "co2_flux_pcair_atm" , "" , "" , "none" , 315.165e-06 +"OCN" , "co2_nat_flux_pcair_atm" , "" , "" , "none" , 284.262e-06 +"OCN" , "o2_flux_pcair_atm" , "" , "" , "none" , 0.21 +"OCN" , "dry_dep_fe_flux_ice_ocn" , "dust" , "./INPUT/dust.nc" , "none" , -1.0e-06 diff --git a/diag_table b/diag_table index a073cb5..6a09391 100644 --- a/diag_table +++ b/diag_table @@ -7,6 +7,7 @@ "access-om3.mom6.h.z%4yr-%2mo", 1, "months", 1, "days", "time", 1, "months" "access-om3.mom6.h.sfc%4yr-%2mo", 1, "days", 1, "days", "time", 1, "months" "access-om3.mom6.h.static", -1, "days", 1, "days", "time" +"access-om3.mom6.h.wombatlite%4yr-%2mo", 1, "months", 1, "days", "time", 1, "years" ### Section-2: Fields List #========================= @@ -149,3 +150,83 @@ "ocean_model", "sin_rot", "sin_rot", "access-om3.mom6.h.static", "all", ".false.", "none", 2 "ocean_model", "cos_rot", "cos_rot", "access-om3.mom6.h.static", "all", ".false.", "none", 2 +# "access-om3.mom6.h.wombatlite%4yr-%2mo" +"ocean_model", "volcello", "volcello", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "pco2", "pco2", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "paco2", "paco2", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "light_limit", "light_limit", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "radbio3d", "radbio3d", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "radbio1", "radbio1", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "det_sed_remin", "det_sed_remin", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "det_sed_depst", "det_sed_depst", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "caco3_sed_remin", "caco3_sed_remin", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "caco3_sed_depst", "caco3_sed_depst", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "wdet100", "wdet100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "npp3d", "npp3d", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "npp2d", "npp2d", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "npp1", "npp1", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "pprod_gross", "pprod_gross", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "pprod_gross_2d", "pprod_gross_2d", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "zprod_gross", "zprod_gross", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic_intmld", "dic_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic_intmld", "adic_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "o2_intmld", "o2_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "no3_intmld", "no3_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "fe_intmld", "fe_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "phy_intmld", "phy_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "det_intmld", "det_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "pprod_gross_intmld", "pprod_gross_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "npp_intmld", "npp_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "radbio_intmld", "radbio_intmld", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic_int100", "dic_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic_int100", "adic_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "o2_int100", "o2_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "no3_int100", "no3_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "fe_int100", "fe_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "phy_int100", "phy_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "det_int100", "det_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "pprod_gross_int100", "pprod_gross_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "npp_int100", "npp_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "radbio_int100", "radbio_int100", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "no3", "no3", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "no3_stf", "no3_stf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "no3_vstf", "no3_vstf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "no3_btf", "no3_btf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "phy", "phy", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "phy_stf", "phy_stf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "phy_trunoff", "phy_trunoff", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "o2", "o2", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "o2_stf", "o2_stf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "o2_stf_gas", "o2_stf_gas", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "o2_btf", "o2_btf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "o2_alpha", "o2_alpha", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "o2_csurf", "o2_csurf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "o2_sc_no", "o2_sc_no", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "zoo", "zoo", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "det", "det", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "caco3", "caco3", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic", "adic", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic_stf", "adic_stf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic_stf_gas", "adic_stf_gas", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic_vstf", "adic_vstf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic_btf", "adic_btf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic_alpha", "adic_alpha", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic_csurf", "adic_csurf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "adic_sc_no", "adic_sc_no", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic", "dic", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic_stf", "dic_stf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic_stf_gas", "dic_stf_gas", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic_vstf", "dic_vstf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic_btf", "dic_btf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic_alpha", "dic_alpha", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic_csurf", "dic_csurf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "dic_sc_no", "dic_sc_no", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "alk", "alk", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "alk_stf", "alk_stf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "alk_vstf", "alk_vstf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "alk_btf", "alk_btf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "fe", "fe", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "fe_stf", "fe_stf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "fe_btf", "fe_btf", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "det_sediment", "det_sediment", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 +"generic_wombatlite", "caco3_sediment", "caco3_sediment", "access-om3.mom6.h.wombatlite%4yr-%2mo", "all", "mean", "none", 2 diff --git a/field_table b/field_table new file mode 100644 index 0000000..f64a6a1 --- /dev/null +++ b/field_table @@ -0,0 +1,115 @@ +# WOMBATlite field table +# =============================================== +"namelists","ocean_mod","generic_wombatlite/*global*" +/ +"namelists","ocean_mod","generic_wombatlite" +init = f +# +no3_src_file = INPUT/GLODAPv2.2016b.NO3_fillmiss.nc +no3_src_var_name = NO3 +no3_src_var_unit = micromoles_per_kg +no3_dest_var_name = no3 +no3_dest_var_unit = mol kg-1 +no3_src_var_record = 1 +no3_src_var_gridspec = NONE +no3_valid_min = 0.0 +# +phy_src_file = INPUT/init_ocean_wombatlite.res.nc +phy_src_var_name = phy +phy_src_var_unit = none +phy_dest_var_name = phy +phy_dest_var_unit = mol kg-1 +phy_src_var_record = 1 +phy_src_var_gridspec = NONE +phy_valid_min = 0.0 +# +o2_src_file = INPUT/GLODAPv2.2016b.oxygen_fillmiss.nc +o2_src_var_name = oxygen +o2_src_var_unit = micromoles_per_kg +o2_dest_var_name = o2 +o2_dest_var_unit = mol kg-1 +o2_src_var_record = 1 +o2_src_var_gridspec = NONE +o2_valid_min = 0.0 +# +zoo_src_file = INPUT/init_ocean_wombatlite.res.nc +zoo_src_var_name = zoo +zoo_src_var_unit = none +zoo_dest_var_name = zoo +zoo_dest_var_unit = mol kg-1 +zoo_src_var_record = 1 +zoo_src_var_gridspec = NONE +zoo_valid_min = 0.0 +# +det_src_file = INPUT/init_ocean_wombatlite.res.nc +det_src_var_name = det +det_src_var_unit = none +det_dest_var_name = det +det_dest_var_unit = mol kg-1 +det_src_var_record = 1 +det_src_var_gridspec = NONE +det_valid_min = 0.0 +# +caco3_src_file = INPUT/init_ocean_wombatlite.res.nc +caco3_src_var_name = caco3 +caco3_src_var_unit = none +caco3_dest_var_name = caco3 +caco3_dest_var_unit = mol kg-1 +caco3_src_var_record = 1 +caco3_src_var_gridspec = NONE +caco3_valid_min = 0.0 +# +adic_src_file = INPUT/GLODAPv2.2016b.TCO2_fillmiss.nc +adic_src_var_name = TCO2 +adic_src_var_unit = micromoles_per_kg +adic_dest_var_name = adic +adic_dest_var_unit = mol kg-1 +adic_src_var_record = 1 +adic_src_var_gridspec = NONE +adic_valid_min = 0.0 +# +dic_src_file = INPUT/GLODAPv2.2016b.PI_TCO2_fillmiss.nc +dic_src_var_name = PI_TCO2 +dic_src_var_unit = micromoles_per_kg +dic_dest_var_name = dic +dic_dest_var_unit = mol kg-1 +dic_src_var_record = 1 +dic_src_var_gridspec = NONE +dic_valid_min = 0.0 +# +alk_src_file = INPUT/GLODAPv2.2016b.TAlk_fillmiss.nc +alk_src_var_name = TAlk +alk_src_var_unit = micromoles_per_kg +alk_dest_var_name = alk +alk_dest_var_unit = mol kg-1 +alk_src_var_record = 1 +alk_src_var_gridspec = NONE +alk_valid_min = 0.0 +# +fe_src_file = INPUT/FEMIP_model_median_iron_2016_fillmiss.nc +fe_src_var_name = IRON +fe_src_var_unit = moles_per_liter +fe_dest_var_name = fe +fe_dest_var_unit = mol kg-1 +fe_src_var_record = 1 +fe_src_var_gridspec = NONE +fe_valid_min = 0.0 +# +caco3_sediment_src_file = INPUT/init_ocean_wombatlite.res.nc +caco3_sediment_src_var_name = caco3_sediment +caco3_sediment_src_var_unit = none +caco3_sediment_dest_var_name = caco3_sediment +caco3_sediment_dest_var_unit = mol m-2 +caco3_sediment_src_var_record = 1 +caco3_sediment_src_var_gridspec = NONE +caco3_sediment_valid_min = 0.0 +# +det_sediment_src_file = INPUT/init_ocean_wombatlite.res.nc +det_sediment_src_var_name = det_sediment +det_sediment_src_var_unit = none +det_sediment_dest_var_name = det_sediment +det_sediment_dest_var_unit = mol m-2 +det_sediment_src_var_record = 1 +det_sediment_src_var_gridspec = NONE +det_sediment_valid_min = 0.0 +/ diff --git a/input.nml b/input.nml index cd9f0dc..3969d3a 100644 --- a/input.nml +++ b/input.nml @@ -5,6 +5,16 @@ parameter_filename = 'MOM_input', 'MOM_override' / +&generic_tracer_nml + do_generic_tracer=.true. + do_generic_WOMBATlite=.true. + force_update_fluxes=.false. !This has to be set for THERMO_SPANS_COUPLING to work +/ + +&generic_wombatlite_nml + co2_calc='ocmip2' +/ + &fms_nml clock_grain = 'ROUTINE' clock_flags = 'NONE' diff --git a/manifests/input.yaml b/manifests/input.yaml index fc65695..7ed145a 100644 --- a/manifests/input.yaml +++ b/manifests/input.yaml @@ -1,6 +1,36 @@ format: yamanifest version: 1.0 --- +work/INPUT/FEMIP_model_median_iron_2016_fillmiss.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2021.06.07/FEMIP_model_median_iron_2016_fillmiss.nc + hashes: + binhash: d59cb334842710e7f04068db990a18ba + md5: b81d7ee79a6ca30bfd2e6ccc49874267 +work/INPUT/GLODAPv2.2016b.NO3_fillmiss.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.NO3_fillmiss.nc + hashes: + binhash: 10c747ff00ecce9227a49e61cc5cf6af + md5: c5afb27948688743858ef966be81ec2e +work/INPUT/GLODAPv2.2016b.PI_TCO2_fillmiss.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.PI_TCO2_fillmiss.nc + hashes: + binhash: 890669fa1729c7e372591b4fd130bdfa + md5: 0aa9f4a37ff5f01cc180d85305815829 +work/INPUT/GLODAPv2.2016b.TAlk_fillmiss.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.TAlk_fillmiss.nc + hashes: + binhash: 5fe4ccda4eb7db55df0d13d7a569eec9 + md5: b84783902f2bc82711496cca49e78a16 +work/INPUT/GLODAPv2.2016b.TCO2_fillmiss.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.TCO2_fillmiss.nc + hashes: + binhash: 2cc9f311509c39e42820d2f33a73d652 + md5: 9f8ba1f96551df518e86e510a765311e +work/INPUT/GLODAPv2.2016b.oxygen_fillmiss.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/GLODAPv2.2016b.oxygen_fillmiss.nc + hashes: + binhash: 5f295cec9429b8ce7b77d8f253fc6d8d + md5: 1abf34fa578d0a589615d5e9a0e465ac work/INPUT/JRA55do-ESMFmesh.nc: fullpath: /g/data/vk83/experiments/inputs/access-om3/share/meshes/share/2024.01.25/JRA55do-ESMFmesh.nc hashes: @@ -76,16 +106,31 @@ work/INPUT/access-om2-1deg-nomask-ESMFmesh.nc: hashes: binhash: 07cb65372f403b87b3002134ea2c31eb md5: 9b7120a42b5cb587492e7c31791eb549 +work/INPUT/dust.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/wombat/forcing/global.1deg/2022.02.24/dust.nc + hashes: + binhash: 4bcaabf23dd4143dfb91628e800f5f3f + md5: b66d8d72cd49801a74da90b211e8dd21 work/INPUT/grid.nc: fullpath: /g/data/vk83/experiments/inputs/access-om3/cice/grids/global.1deg/2024.05.14/grid.nc hashes: binhash: 60ac2869d4521fd6441a90b519d9bce0 md5: 544a40b634c182f3e182da6bcbe8be7b +work/INPUT/grid_spec.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/mom/grids/mosaic/global.1deg/2024.05.08/grid_spec.nc + hashes: + binhash: 750b8808e39f28ea7c191eb448872f44 + md5: 709268cd891e6f0e827f6de0249f1a3d work/INPUT/iced.1900-01-01-10800.nc: fullpath: /g/data/vk83/experiments/inputs/access-om3/cice/initial_conditions/global.1deg/2023.07.28/iced.1900-01-01-10800.nc hashes: binhash: a88d7f33c7eef8f6870773f7cc47fc28 md5: 87c012d60c58c65bb56caa98779e5e51 +work/INPUT/init_ocean_wombatlite.res.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/wombat/initial_conditions/global.1deg/2024.04.02/init_ocean_wombatlite.res.nc + hashes: + binhash: 89f0a0e9e6a3bfb383eb03a5784470da + md5: 1648193a63179513a705541d5f5f508f work/INPUT/kmt.nc: fullpath: /g/data/vk83/experiments/inputs/access-om3/cice/grids/global.1deg/2024.05.14/kmt.nc hashes: @@ -96,6 +141,11 @@ work/INPUT/ocean_hgrid.nc: hashes: binhash: 81c5dd8f8e3c930827a9b4aeef23d06b md5: 51f58be0f4ea6da2cb438a893f95c689 +work/INPUT/ocean_mosaic.nc: + fullpath: /g/data/vk83/experiments/inputs/access-om3/mom/grids/mosaic/global.1deg/2020.05.30/ocean_mosaic.nc + hashes: + binhash: a471a6774df6f44947537f135d2daa64 + md5: cb42e630ee31d3686156fcbdc2f9d07c work/INPUT/ocean_temp_salt.res.nc: fullpath: /g/data/vk83/experiments/inputs/access-om3/mom/initial_conditions/global.1deg/2020.10.22/ocean_temp_salt.res.nc hashes: diff --git a/nuopc.runconfig b/nuopc.runconfig index 8c630c0..5fca340 100644 --- a/nuopc.runconfig +++ b/nuopc.runconfig @@ -138,6 +138,7 @@ ALLCOMP_attributes:: tfreeze_option = linear_salt wav_coupling_to_cice = .false. write_restart_at_endofrun = .false. + additional_restart_dir = RESTART :: MED_attributes::